U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CDHR5 cadherin related family member 5 [ Bufo bufo (common toad) ]

Gene ID: 120981038, updated on 21-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CDHR5
Gene description
cadherin related family member 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Bufo bufo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Bufonidae; Bufo
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 10
Exon count:
15
Annotation release Status Assembly Chr Location
100 current aBufBuf1.1 (GCF_905171765.1) 10 NC_053398.1 (46726569..46777811)

Chromosome 10 - NC_053398.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120980575 Neighboring gene DEAF1 transcription factor Neighboring gene dopamine receptor D4 Neighboring gene uncharacterized LOC120980985 Neighboring gene malignant fibrous histiocytoma-amplified sequence 1 homolog Neighboring gene interferon regulatory factor 7

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_053398.1 Chromosome 10 Reference aBufBuf1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables biotin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adherens junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catenin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cadherin-related family member 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Bufo bufo Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aBufBuf1.1

Genomic

  1. NC_053398.1 Reference aBufBuf1.1

    Range
    46726569..46777811
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040410501.1 → XP_040266435.1  cadherin-related family member 5 isoform X1

    Conserved Domains (1) summary
    cd11304
    Location:259 → 334
    Cadherin_repeat; Cadherin tandem repeat domain

  2. XM_040410502.1 → XP_040266436.1  cadherin-related family member 5 isoform X2

    Conserved Domains (1) summary
    cd11304
    Location:259 → 334
    Cadherin_repeat; Cadherin tandem repeat domain

  3. XM_040410503.1 → XP_040266437.1  cadherin-related family member 5 isoform X3

    Conserved Domains (1) summary
    cd11304
    Location:259 → 334
    Cadherin_repeat; Cadherin tandem repeat domain

  4. XM_040410504.1 → XP_040266438.1  cadherin-related family member 5 isoform X4

    Conserved Domains (1) summary
    cd11304
    Location:259 → 334
    Cadherin_repeat; Cadherin tandem repeat domain

  5. XM_040410505.1 → XP_040266439.1  cadherin-related family member 5 isoform X5

    Conserved Domains (1) summary
    cd11304
    Location:259 → 334
    Cadherin_repeat; Cadherin tandem repeat domain

  6. XM_040410506.1 → XP_040266440.1  cadherin-related family member 5 isoform X6

    Conserved Domains (1) summary
    cd11304
    Location:259 → 334
    Cadherin_repeat; Cadherin tandem repeat domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.