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ctnna2 catenin (cadherin-associated protein), alpha 2 [ Acanthopagrus latus (yellowfin seabream) ]

Gene ID: 119021152, updated on 21-Mar-2024

Summary

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Gene symbol
ctnna2
Gene description
catenin (cadherin-associated protein), alpha 2
See related
EnsemblRapid:ENSALTG00010012337
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthopagrus latus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Acanthopagrus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 1
Exon count:
19
Annotation release Status Assembly Chr Location
100 current fAcaLat1.1 (GCF_904848185.1) 1 NC_051039.1 (13523697..13833124, complement)

Chromosome 1 - NC_051039.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119022406 Neighboring gene succinate-CoA ligase GDP/ADP-forming subunit alph Neighboring gene uncharacterized LOC119022448 Neighboring gene leucine rich repeat transmembrane neuronal 1 Neighboring gene uncharacterized LOC119021170 Neighboring gene uncharacterized LOC119023108

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051039.1 Chromosome 1 Reference fAcaLat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables beta-catenin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catenin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
catenin alpha-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthopagrus latus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAcaLat1.1 Primary Assembly

Genomic

  1. NC_051039.1 Reference fAcaLat1.1 Primary Assembly

    Range
    13523697..13833124 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037101210.1 → XP_036957105.1  catenin alpha-2 isoform X1

    Related
    ENSALTP00010032599.1, ENSALTT00010035369.1
    Conserved Domains (1) summary
    pfam01044
    Location:82 → 866
    Vinculin; Vinculin family

  2. XM_037101216.1 → XP_036957111.1  catenin alpha-2 isoform X2

    Conserved Domains (1) summary
    pfam01044
    Location:82 → 355
    Vinculin; Vinculin family
Nucleotide Protein
Heading Accession and Version

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