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PSPTO_RS29410 DotA/TraY family protein [ Pseudomonas syringae pv. tomato str. DC3000 ]

Gene ID: 1187447, updated on 31-Jan-2024

Summary

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Gene symbol
PSPTO_RS29410
Gene description
DotA/TraY family protein
Locus tag
PSPTO_RS29410
Gene type
protein coding
Organism
Pseudomonas syringae pv. tomato str. DC3000 (strain: DC3000, pathovar: tomato, type-material: reference strain of Pseudomonas syringae group genomosp. 3)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
Old locus tag
PSPTO_B0069; PSPTOB0069
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Genomic context

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Location:
plasmid: pDC3000B
Sequence:
NC_004632.1 (58458..60602)

NC_004632.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene conjugal transfer protein Neighboring gene conjugal transfer protein TraW Neighboring gene conjugal transfer protein TraX Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene plasmid IncI1-type surface exclusion protein ExcA Neighboring gene type II toxin-antitoxin system VapC family toxin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004632.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence polymorphism of dotA and mip alleles mediating invasion and intracellular replication of Legionella pneumophila. Bumbaugh AC, et al. Curr Microbiol, 2002 May. PMID 11927981
  2. The transfer region of IncI1 plasmid R64: similarities between R64 tra and legionella icm/dot genes. Komano T, et al. Mol Microbiol, 2000 Mar. PMID 10760136
  3. The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Buell CR, et al. Proc Natl Acad Sci U S A, 2003 Sep 2. PMID 12928499, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
DotA/TraY family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004632.1 Reference assembly

    Range
    58458..60602
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011106993.1 DotA/TraY family protein [Pseudomonas syringae group genomosp. 3]

    See identical proteins and their annotated locations for WP_011106993.1

    UniProtKB/TrEMBL
    A0A3M6BX19, Q88BR9
    Conserved Domains (1) summary
    cl29942
    Location:40 → 665
    DotA; Phagosome trafficking protein DotA
Nucleotide Protein
Heading Accession and Version