U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component [ Arvicanthis niloticus (Nile rat) ]

Gene ID: 117713038, updated on 19-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Leo1
Gene description
LEO1 homolog, Paf1/RNA polymerase II complex component
See related
EnsemblRapid:ENSANLG00005007015
Gene type
protein coding
RefSeq status
MODEL
Organism
Arvicanthis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Leo1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
12
Annotation release Status Assembly Chr Location
100 current mArvNil1.pat.X (GCF_011762505.1) 7 NC_047664.1 (8738584..8761799)

Chromosome 7 - NC_047664.1Genomic Context describing neighboring genes Neighboring gene BCL2 like 10 Neighboring gene mitogen-activated protein kinase 6 Neighboring gene U6 spliceosomal RNA Neighboring gene RNA polymerase-associated protein LEO1-like Neighboring gene tropomodulin 3

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_047664.1 Chromosome 7 Reference mArvNil1.pat.X

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II C-terminal domain phosphoserine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cdc73/Paf1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
RNA polymerase-associated protein LEO1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Arvicanthis niloticus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mArvNil1.pat.X

Genomic

  1. NC_047664.1 Reference mArvNil1.pat.X

    Range
    8738584..8761799
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034509348.1 → XP_034365239.1  RNA polymerase-associated protein LEO1 isoform X1

    Related
    ENSANLP00005008706.1, ENSANLT00005009925.1
    Conserved Domains (2) summary
    pfam04004
    Location:376 → 538
    Leo1; Leo1-like protein
    NF033609
    Location:9 → 363
    MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA

  2. XM_034509349.1 → XP_034365240.1  RNA polymerase-associated protein LEO1 isoform X2

    Conserved Domains (2) summary
    pfam04004
    Location:376 → 538
    Leo1; Leo1-like protein
    NF033609
    Location:9 → 363
    MSCRAMM_ClfA; MSCRAMM family adhesin clumping factor ClfA
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.