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LIN9 lin-9 DREAM MuvB core complex component [ Geotrypetes seraphini ]

Gene ID: 117358213, updated on 11-Apr-2024

Summary

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Gene symbol
LIN9
Gene description
lin-9 DREAM MuvB core complex component
Gene type
protein coding
RefSeq status
MODEL
Organism
Geotrypetes seraphini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Geotrypetes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
100 current aGeoSer1.1 (GCF_902459505.1) 3 NC_047086.1 (406345520..406579554)

Chromosome 3 - NC_047086.1Genomic Context describing neighboring genes Neighboring gene stum, mechanosensory transduction mediator homolog Neighboring gene poly(ADP-ribose) polymerase 1 Neighboring gene acyl-CoA binding domain containing 3 Neighboring gene histone H3.3A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047086.1 Chromosome 3 Reference aGeoSer1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription repressor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein lin-9 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geotrypetes seraphini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aGeoSer1.1 Primary Assembly

Genomic

  1. NC_047086.1 Reference aGeoSer1.1 Primary Assembly

    Range
    406345520..406579554
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033939856.1 → XP_033795747.1  protein lin-9 homolog isoform X1

    UniProtKB/TrEMBL
    A0A6P8Q833
    Conserved Domains (1) summary
    pfam06584
    Location:157 → 261
    DIRP

  2. XM_033939857.1 → XP_033795748.1  protein lin-9 homolog isoform X2

    UniProtKB/TrEMBL
    A0A6P8R6J2
    Conserved Domains (1) summary
    pfam06584
    Location:156 → 260
    DIRP

  3. XM_033939858.1 → XP_033795749.1  protein lin-9 homolog isoform X3

    UniProtKB/TrEMBL
    A0A6P8QGJ0
    Conserved Domains (1) summary
    pfam06584
    Location:136 → 240
    DIRP

  4. XM_033939861.1 → XP_033795752.1  protein lin-9 homolog isoform X4

    UniProtKB/TrEMBL
    A0A6P8Q841
    Conserved Domains (1) summary
    pfam06584
    Location:96 → 200
    DIRP

  5. XM_033939859.1 → XP_033795750.1  protein lin-9 homolog isoform X4

    UniProtKB/TrEMBL
    A0A6P8Q841
    Conserved Domains (1) summary
    pfam06584
    Location:96 → 200
    DIRP

  6. XM_033939860.1 → XP_033795751.1  protein lin-9 homolog isoform X4

    UniProtKB/TrEMBL
    A0A6P8Q841
    Conserved Domains (1) summary
    pfam06584
    Location:96 → 200
    DIRP
Nucleotide Protein
Heading Accession and Version

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