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LOC116699405 zinc finger protein 382-like [ Etheostoma spectabile (orangethroat darter) ]

Gene ID: 116699405, updated on 18-Mar-2024

Summary

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Gene symbol
LOC116699405
Gene description
zinc finger protein 382-like
Locus tag
FQN60_016643
Gene type
protein coding
RefSeq status
MODEL
Organism
Etheostoma spectabile
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
Orthologs
zebrafish all
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Genomic context

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See LOC116699405 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
2
Annotation release Status Assembly Chr Location
100 current UIUC_Espe_1.0 (GCF_008692095.1) 12 NC_045744.1 (27906085..27908891, complement)

Chromosome 12 - NC_045744.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116699409 Neighboring gene Fc receptor, IgE, high affinity I, gamma polypeptide like Neighboring gene nectin cell adhesion molecule 4b Neighboring gene dual specificity testis-specific protein kinase 2-like Neighboring gene uncharacterized LOC116699408 Neighboring gene uncharacterized LOC116699404

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045744.1 Chromosome 12 Reference UIUC_Espe_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 382-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Etheostoma spectabile Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UIUC_Espe_1.0 Primary Assembly

Genomic

  1. NC_045744.1 Reference UIUC_Espe_1.0 Primary Assembly

    Range
    27906085..27908891 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032531949.1 → XP_032387840.1  zinc finger protein 382-like

    Conserved Domains (3) summary
    sd00017
    Location:343 → 363
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:369 → 391
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:355 → 380
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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