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LOC116679837 microspherule protein 1-like [ Etheostoma spectabile (orangethroat darter) ]

Gene ID: 116679837, updated on 14-Dec-2023

Summary

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Gene symbol
LOC116679837
Gene description
microspherule protein 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Etheostoma spectabile
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
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Genomic context

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See LOC116679837 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current UIUC_Espe_1.0 (GCF_008692095.1) Unplaced Scaffold NW_022604179.1 (771286..777642, complement)

NW_022604179.1Genomic Context describing neighboring genes Neighboring gene matrix metalloproteinase-19-like Neighboring gene transmembrane protein 198-like Neighboring gene sulfite oxidase-like Neighboring gene 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial-like Neighboring gene tRNA (guanine-N(7)-)-methyltransferase-like Neighboring gene E3 ubiquitin-protein ligase MARCH9-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022604179 Unplaced Scaffold Reference UIUC_Espe_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G-quadruplex RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ino80 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of MLL1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of NSL complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
microspherule protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Etheostoma spectabile Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UIUC_Espe_1.0 Primary Assembly

Genomic

  1. NW_022604179.1 Reference UIUC_Espe_1.0 Primary Assembly

    Range
    771286..777642 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032509310.1 → XP_032365201.1  microspherule protein 1-like

    Conserved Domains (2) summary
    cd00060
    Location:360 → 450
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam13325
    Location:138 → 335
    MCRS_N; N-terminal region of micro-spherule protein
Nucleotide Protein
Heading Accession and Version

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