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TRIM7 tripartite motif containing 7 [ Hylobates moloch (silvery gibbon) ]

Gene ID: 116471965, updated on 18-Mar-2024

Summary

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Gene symbol
TRIM7
Gene description
tripartite motif containing 7
See related
EnsemblRapid:ENSHMOG00010010222
Gene type
protein coding
RefSeq status
MODEL
Organism
Hylobates moloch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Hylobates
Orthologs
human mouse all
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Genomic context

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See TRIM7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_07 current HMol_V3 (GCF_009828535.3) Unplaced Scaffold NW_026652281.1 (157453300..157465235, complement)
100 previous assembly HMol (GCF_009828535.1) Unplaced Scaffold NW_022454847.1 (157453118..157465226, complement)

NW_026652281.1Genomic Context describing neighboring genes Neighboring gene transfer RNA proline (anticodon UGG) Neighboring gene transfer RNA threonine (anticodon UGU) Neighboring gene uncharacterized LOC116471976 Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene transfer RNA lysine (anticodon CUU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase TRIM7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009828535.3-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HMol_V3

Genomic

  1. NW_026652281.1 Reference HMol_V3

    Range
    157453300..157465235 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032158925.2 → XP_032014816.1  E3 ubiquitin-protein ligase TRIM7 isoform X1

    Conserved Domains (4) summary
    COG0419
    Location:146 → 272
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd13740
    Location:366 → 534
    SPRY_PRY_TRIM7; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)
    cd16592
    Location:26 → 82
    RING-HC_TRIM7_C-IV; RING finger, HC subclass, found in tripartite motif-containing protein 7 (TRIM7) and similar proteins
    cd19762
    Location:129 → 171
    Bbox2_TRIM7-like; B-box-type 2 zinc finger found in tripartite motif-containing proteins TRIM7, TRIM27 and similar proteins

  2. XM_032158926.2 → XP_032014817.1  E3 ubiquitin-protein ligase TRIM7 isoform X2

    Related
    ENSHMOP00010011470.1, ENSHMOT00010015183.1
    Conserved Domains (4) summary
    COG0419
    Location:146 → 272
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd13740
    Location:343 → 511
    SPRY_PRY_TRIM7; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)
    cd16592
    Location:26 → 82
    RING-HC_TRIM7_C-IV; RING finger, HC subclass, found in tripartite motif-containing protein 7 (TRIM7) and similar proteins
    cd19762
    Location:129 → 171
    Bbox2_TRIM7-like; B-box-type 2 zinc finger found in tripartite motif-containing proteins TRIM7, TRIM27 and similar proteins
Nucleotide Protein
Heading Accession and Version

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