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FAM210B family with sequence similarity 210 member B [ Homo sapiens (human) ]

Gene ID: 116151, updated on 12-Oct-2019

Summary

Official Symbol
FAM210Bprovided by HGNC
Official Full Name
family with sequence similarity 210 member Bprovided by HGNC
Primary source
HGNC:HGNC:16102
See related
Ensembl:ENSG00000124098
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
5A3; C20orf108; dJ1167H4.1
Expression
Ubiquitous expression in ovary (RPKM 51.5), adrenal (RPKM 50.1) and 25 other tissues See more
Orthologs

Genomic context

See FAM210B in Genome Data Viewer
Location:
20q13.2
Exon count:
3
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 20 NC_000020.11 (56358974..56368663)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (54933983..54943719)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene RNA, 5S ribosomal pseudogene 487 Neighboring gene melanocortin 3 receptor Neighboring gene aurora kinase A Neighboring gene cleavage stimulation factor subunit 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • DKFZp434A1114

Gene Ontology Provided by GOA

Process Evidence Code Pubs
cellular response to estradiol stimulus IDA
Inferred from Direct Assay
more info
PubMed 
erythrocyte maturation IEA
Inferred from Electronic Annotation
more info
 
positive regulation of erythrocyte differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
intrinsic component of membrane IDA
Inferred from Direct Assay
more info
PubMed 
mitochondrial outer membrane IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
protein FAM210B, mitochondrial
Names
protein FAM210B
transmembrane protein C20orf108

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_080821.3NP_543011.2  protein FAM210B, mitochondrial

    See identical proteins and their annotated locations for NP_543011.2

    Status: VALIDATED

    Source sequence(s)
    AK075565, AL133555, DB500825
    Consensus CDS
    CCDS13450.1
    UniProtKB/Swiss-Prot
    Q96KR6
    Related
    ENSP00000360437.3, ENST00000371384.4
    Conserved Domains (1) summary
    pfam06916
    Location:87174
    DUF1279; Protein of unknown function (DUF1279)

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p13 Primary Assembly

    Range
    56358974..56368663
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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