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GHDC GH3 domain containing [ Taeniopygia guttata (zebra finch) ]

Gene ID: 115490658, updated on 17-Mar-2024

Summary

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Gene symbol
GHDC
Gene description
GH3 domain containing
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See GHDC in Genome Data Viewer
Location:
chromosome: 27
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 27 NC_044239.2 (2293380..2296716)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 27 NC_045025.1 (2339383..2342940)

Chromosome 27 - NC_044239.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115490650 Neighboring gene signal transducer and activator of transcription 5B Neighboring gene inactive phospholipase C-like protein 2 Neighboring gene hypocretin neuropeptide precursor Neighboring gene potassium voltage-gated channel subfamily H member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acid-amino acid ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GH3 domain-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044239.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    2293380..2296716
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041721506.1 → XP_041577440.1  GH3 domain-containing protein isoform X1

    UniProtKB/TrEMBL
    A0A674H5P2
    Conserved Domains (1) summary
    cl21606
    Location:161 → 567
    GH3; GH3 auxin-responsive promoter

  2. XM_030256044.3 → XP_030111904.3  GH3 domain-containing protein isoform X2

    UniProtKB/TrEMBL
    A0A674H5P2
    Conserved Domains (1) summary
    cl21606
    Location:163 → 542
    GH3; GH3 auxin-responsive promoter
Nucleotide Protein
Heading Accession and Version

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