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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_053181.1 RefSeqGene
- Range
-
5613..656845
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001281956.2 → NP_001268885.1 CUB and sushi domain-containing protein 2 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AB212622, AC115285, AK095627, AY210418
- Consensus CDS
-
CCDS60082.1
- UniProtKB/Swiss-Prot
-
Q7Z408
- Related
- ENSP00000362479.4, ENST00000373381.9
- Conserved Domains (6) summary
-
- cd00033
Location:561 → 615
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00032
Location:179 → 236
- CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
- cd00041
Location:618 → 725
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- pfam00431
Location:1485 → 1590
- CUB; CUB domain
- pfam00084
Location:2292 → 2349
- Sushi; Sushi repeat (SCR repeat)
- cl27761
Location:2792 → 3032
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
-
NM_052896.5 → NP_443128.2 CUB and sushi domain-containing protein 2 isoform 2
See identical proteins and their annotated locations for NP_443128.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and contains multiple differences in the coding region, compared to variant 1, including initiation of translation at an alternate start codon. The encoded isoform (2) is shorter and has a distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AB212622, AC115285, AC115286, AK095627, AY210418
- Consensus CDS
-
CCDS380.1
- UniProtKB/Swiss-Prot
- Q7Z408, Q9HCY7
- Related
- ENSP00000362486.3, ENST00000373388.7
- Conserved Domains (6) summary
-
- cd00033
Location:2658 → 2711
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00032
Location:139 → 196
- CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
- PHA02927
Location:2947 → 3186
- PHA02927; secreted complement-binding protein; Provisional
- cd00041
Location:578 → 685
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- pfam00084
Location:2294 → 2351
- Sushi; Sushi repeat (SCR repeat)
- pfam00431
Location:1445 → 1550
- CUB; CUB domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000001.11 Reference GRCh38.p14 Primary Assembly
- Range
-
33513998..34165842 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047443685.1 → XP_047299641.1 CUB and sushi domain-containing protein 2 isoform X9
- Related
- ENSP00000483463.1, ENST00000619121.4
-
XM_047443656.1 → XP_047299612.1 CUB and sushi domain-containing protein 2 isoform X3
-
XM_047443666.1 → XP_047299622.1 CUB and sushi domain-containing protein 2 isoform X5
-
XM_047443642.1 → XP_047299598.1 CUB and sushi domain-containing protein 2 isoform X2
-
XM_047443607.1 → XP_047299563.1 CUB and sushi domain-containing protein 2 isoform X1
-
XM_017000185.2 → XP_016855674.1 CUB and sushi domain-containing protein 2 isoform X1
- Conserved Domains (6) summary
-
- cd00033
Location:2656 → 2709
- CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
- smart00032
Location:179 → 236
- CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)
- PHA02927
Location:2767 → 3007
- PHA02927; secreted complement-binding protein; Provisional
- cd00041
Location:618 → 725
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- pfam00084
Location:2292 → 2349
- Sushi; Sushi repeat (SCR repeat)
- pfam00431
Location:1485 → 1590
- CUB; CUB domain
-
XM_047443661.1 → XP_047299617.1 CUB and sushi domain-containing protein 2 isoform X4
-
XM_017000191.2 → XP_016855680.1 CUB and sushi domain-containing protein 2 isoform X6
-
XM_017000193.2 → XP_016855682.1 CUB and sushi domain-containing protein 2 isoform X8
-
XM_017000192.2 → XP_016855681.1 CUB and sushi domain-containing protein 2 isoform X7
Alternate T2T-CHM13v2.0
Genomic
-
NC_060925.1 Alternate T2T-CHM13v2.0
- Range
-
33375608..34027570 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)