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tph1a tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [ Electrophorus electricus (electric eel) ]

Gene ID: 113584487, updated on 18-Jun-2024

Summary

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Gene symbol
tph1a
Gene description
tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a
See related
Ensembl:ENSEEEG00000011930
Gene type
protein coding
RefSeq status
MODEL
Organism
Electrophorus electricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gymnotiformes; Gymnotoidei; Gymnotidae; Electrophorus
Also known as
tph1
Orthologs
human zebrafish all
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Genomic context

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See tph1a in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
101 current fEleEle1.pri (GCF_013358815.1) 2 NC_049536.1 (10319038..10324745)
100 previous assembly Ee_SOAP_WITH_SSPACE (GCF_003665695.1) Unplaced Scaffold NW_020826329.1 (356904..362501, complement)

Chromosome 2 - NC_049536.1Genomic Context describing neighboring genes Neighboring gene mucin-2-like Neighboring gene uncharacterized LOC118240945 Neighboring gene serum amyloid A-like 1 Neighboring gene secretion regulating guanine nucleotide exchange factor Neighboring gene potassium voltage-gated channel, Shaw-related subfamily, member 1b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tryptophan 5-monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in aromatic amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in serotonin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tryptophan 5-hydroxylase 1a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Electrophorus electricus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEleEle1.pri

Genomic

  1. NC_049536.1 Reference fEleEle1.pri

    Range
    10319038..10324745
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035536497.1 → XP_035392390.1  tryptophan 5-hydroxylase 1a

    UniProtKB/TrEMBL
    A0A4W4FL51
    Related
    ENSEEEP00000024674.2, ENSEEET00000024958.2
    Conserved Domains (1) summary
    TIGR01270
    Location:32 → 477
    Trp_5_monoox; tryptophan 5-monooxygenase, tetrameric
Nucleotide Protein
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