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CD4 CD4 molecule [ Athene cunicularia (burrowing owl) ]

Gene ID: 113476745, updated on 15-Mar-2024

Summary

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Gene symbol
CD4
Gene description
CD4 molecule
See related
Ensembl:ENSACUG00000004552
Gene type
protein coding
RefSeq status
MODEL
Organism
Athene cunicularia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Strigiformes; Strigidae; Athene
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
100 current athCun1 (GCF_003259725.1) 1 Unlocalized Scaffold NW_020799091.1 (127318398..127330982)

NW_020799091.1Genomic Context describing neighboring genes Neighboring gene myeloid leukemia factor 2 Neighboring gene lymphocyte activating 3 Neighboring gene prolyl 3-hydroxylase 3 Neighboring gene G protein-coupled receptor 162 Neighboring gene G protein subunit beta 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020799091 Chromosome 1 Unlocalized Scaffold Reference athCun1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables MHC class II protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in T cell activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in interleukin-15-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of ERK1 and ERK2 cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane raft IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-cell surface glycoprotein CD4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Athene cunicularia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference athCun1

Genomic

  1. NW_020799091.1 Reference athCun1

    Range
    127318398..127330982
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026842690.1 → XP_026698491.1  T-cell surface glycoprotein CD4 isoform X1

    UniProtKB/TrEMBL
    A0A663M4K1
    Related
    ENSACUP00000006642.1, ENSACUT00000007110.1
    Conserved Domains (2) summary
    pfam12104
    Location:454 → 481
    Tcell_CD4_C; T cell CD4 receptor C terminal region
    cl11960
    Location:119 → 214
    Ig; Immunoglobulin domain

  2. XM_026842770.1 → XP_026698571.1  T-cell surface glycoprotein CD4 isoform X2

    UniProtKB/TrEMBL
    A0A663M4K1
Nucleotide Protein
Heading Accession and Version

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