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FN1 fibronectin 1 [ Vulpes vulpes (red fox) ]

Gene ID: 112922455, updated on 15-Mar-2024

Summary

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Gene symbol
FN1
Gene description
fibronectin 1
See related
Ensembl:ENSVVUG00000008974
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
46
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356474.1 (8574493..8640781)

NW_020356474.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein A3 pseudogene Neighboring gene transmembrane protein 169 Neighboring gene peroxisomal trans-2-enoyl-CoA reductase Neighboring gene 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase Neighboring gene ATP binding cassette subfamily A member 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020356474 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proteoglycan binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-substrate junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fibronectin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356474.1 Reference VulVul2.2 Primary Assembly

    Range
    8574493..8640781
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026002033.1 → XP_025857818.1  fibronectin

    UniProtKB/TrEMBL
    A0A3Q7SMN1
    Related
    ENSVVUP00000012158.1, ENSVVUT00000015926.1
    Conserved Domains (6) summary
    smart00059
    Location:324 → 372
    FN2; Fibronectin type 2 domain
    smart00058
    Location:157 → 201
    FN1; Fibronectin type 1 domain
    cd00061
    Location:2356 → 2395
    FN1; Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces ...
    cd00063
    Location:1966 → 2046
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00039
    Location:202 → 241
    fn1; Fibronectin type I domain
    pfam00041
    Location:1511 → 1592
    fn3; Fibronectin type III domain
Nucleotide Protein Strain
Heading Accession and Version

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