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THOC2 THO complex 2 [ Canis lupus dingo (dingo) ]

Gene ID: 112649054, updated on 3-Apr-2024

Summary

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Gene symbol
THOC2
Gene description
THO complex 2
See related
Ensembl:ENSCAFG00020002284
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
43
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) X NC_064281.1 (95533181..95663080, complement)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) X Unlocalized Scaffold NW_023365275.1 (95904665..96034951, complement)

Chromosome X - NC_064281.1Genomic Context describing neighboring genes Neighboring gene ribonucleoside-diphosphate reductase subunit M2-like Neighboring gene glutamate ionotropic receptor AMPA type subunit 3 Neighboring gene U4 spliceosomal RNA Neighboring gene tyrosine-protein kinase Fer-like Neighboring gene uncharacterized LOC118353767 Neighboring gene uncharacterized LOC112649230 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of THO complex part of transcription export complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
THO complex subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064281.1 Reference ASM325472v2

    Range
    95533181..95663080 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049107489.1 → XP_048963446.1  THO complex subunit 2 isoform X8

  2. XM_049107488.1 → XP_048963445.1  THO complex subunit 2 isoform X4

  3. XM_035712265.2 → XP_035568158.1  THO complex subunit 2 isoform X3

    UniProtKB/TrEMBL
    A0A8C0SZG3
    Conserved Domains (5) summary
    TIGR01642
    Location:1462 → 1570
    U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor
    pfam11262
    Location:888 → 1187
    Tho2; Transcription factor/nuclear export subunit protein 2
    pfam11732
    Location:582 → 656
    Thoc2; Transcription- and export-related complex subunit
    pfam16134
    Location:30 → 580
    THOC2_N; THO complex subunit 2 N-terminus
    NF033838
    Location:1315 → 1565
    PspC_subgroup_1; pneumococcal surface protein PspC, choline-binding form

  4. XM_049107490.1 → XP_048963447.1  THO complex subunit 2 isoform X8

  5. XM_025431115.3 → XP_025286900.1  THO complex subunit 2 isoform X7

    UniProtKB/TrEMBL
    A0A8C0SZG3
    Conserved Domains (5) summary
    TIGR01642
    Location:1447 → 1555
    U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor
    pfam11262
    Location:874 → 1173
    Tho2; Transcription factor/nuclear export subunit protein 2
    pfam11732
    Location:568 → 642
    Thoc2; Transcription- and export-related complex subunit
    pfam16134
    Location:10 → 566
    THOC2_N; THO complex subunit 2 N-terminus
    NF033838
    Location:1300 → 1550
    PspC_subgroup_1; pneumococcal surface protein PspC, choline-binding form

  6. XM_025431114.3 → XP_025286899.1  THO complex subunit 2 isoform X6

    UniProtKB/TrEMBL
    A0A8C0SXD5, A0A8C0SZG3, A0A8P0SMM7
    Conserved Domains (5) summary
    TIGR01642
    Location:1448 → 1556
    U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor
    pfam11262
    Location:874 → 1173
    Tho2; Transcription factor/nuclear export subunit protein 2
    pfam11732
    Location:568 → 642
    Thoc2; Transcription- and export-related complex subunit
    pfam16134
    Location:10 → 566
    THOC2_N; THO complex subunit 2 N-terminus
    NF033838
    Location:1301 → 1551
    PspC_subgroup_1; pneumococcal surface protein PspC, choline-binding form

  7. XM_049107487.1 → XP_048963444.1  THO complex subunit 2 isoform X2

  8. XM_049107486.1 → XP_048963443.1  THO complex subunit 2 isoform X1

  9. XM_049107491.1 → XP_048963448.1  THO complex subunit 2 isoform X8

  10. XM_025431113.3 → XP_025286898.1  THO complex subunit 2 isoform X5

    UniProtKB/TrEMBL
    A0A8C0QUQ4
    Related
    ENSCAFP00020004203.1
    Conserved Domains (5) summary
    TIGR01642
    Location:1448 → 1556
    U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor
    pfam11262
    Location:874 → 1173
    Tho2; Transcription factor/nuclear export subunit protein 2
    pfam11732
    Location:568 → 642
    Thoc2; Transcription- and export-related complex subunit
    pfam16134
    Location:10 → 566
    THOC2_N; THO complex subunit 2 N-terminus
    NF033838
    Location:1301 → 1551
    PspC_subgroup_1; pneumococcal surface protein PspC, choline-binding form
Nucleotide Protein
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