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LOC112273260 probable histidine kinase 6 [ Physcomitrium patens ]

Gene ID: 112273260, updated on 9-Nov-2023

Summary

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Gene symbol
LOC112273260
Gene description
probable histidine kinase 6
Locus tag
PHYPA_025262
Gene type
protein coding
RefSeq status
MODEL
Organism
Physcomitrium patens
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium
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Genomic context

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See LOC112273260 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Phypa V3 (GCF_000002425.4) 20 NC_037272.1 (11484498..11491415, complement)

Chromosome 20 - NC_037272.1Genomic Context describing neighboring genes Neighboring gene ataxin-7-like protein 1 Neighboring gene protein DJ-1 homolog A-like Neighboring gene asparagine synthetase [glutamine-hydrolyzing] 2-like Neighboring gene protein SAWADEE HOMEODOMAIN HOMOLOG 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037272.1 Chromosome 20 Reference Phypa V3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphorelay sensor kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphorelay signal transduction system IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histidine kinase 4-like; probable histidine kinase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Physcomitrella patens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Phypa V3 Primary Assembly

Genomic

  1. NC_037272.1 Reference Phypa V3 Primary Assembly

    Range
    11484498..11491415 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024501783.1 → XP_024357551.1  histidine kinase 4-like isoform X3

    UniProtKB/TrEMBL
    A0A7I4C2U2
    Conserved Domains (2) summary
    cl17823
    Location:12 → 210
    MASE1
    cl28304
    Location:529 → 1108
    PRK15347; two component system sensor kinase SsrA; Provisional

  2. XM_024501781.1 → XP_024357549.1  probable histidine kinase 6 isoform X1

    UniProtKB/TrEMBL
    A0A7I4BZG4, A0A7I4C2U2
    Conserved Domains (2) summary
    cl17823
    Location:12 → 210
    MASE1
    cl28304
    Location:529 → 1124
    PRK15347; two component system sensor kinase SsrA; Provisional

  3. XM_024501782.1 → XP_024357550.1  histidine kinase 4-like isoform X2

    UniProtKB/TrEMBL
    A0A2K1IVL4, A0A7I4C2U2
    Conserved Domains (2) summary
    cl17823
    Location:12 → 210
    MASE1
    cl28304
    Location:529 → 1120
    PRK15347; two component system sensor kinase SsrA; Provisional
Nucleotide Protein
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