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bop1 BOP1 ribosomal biogenesis factor [ Paramormyrops kingsleyae ]

Gene ID: 111843994, updated on 15-Mar-2024

Summary

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Gene symbol
bop1
Gene description
BOP1 ribosomal biogenesis factor
See related
Ensembl:ENSPKIG00000020273
Gene type
protein coding
RefSeq status
MODEL
Organism
Paramormyrops kingsleyae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Mormyridae; Paramormyrops
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current PKINGS_0.1 (GCF_002872115.1) Unplaced Scaffold NW_019711899.1 (1941285..1985866, complement)

NW_019711899.1Genomic Context describing neighboring genes Neighboring gene RecQ helicase-like 4 Neighboring gene HGH1 homolog (S. cerevisiae) Neighboring gene scleraxis bHLH transcription factor a Neighboring gene uncharacterized LOC111843851 Neighboring gene heat shock transcription factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019711899 Unplaced Scaffold Reference PKINGS_0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribonucleoprotein complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PeBoW complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, large subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribosome biogenesis protein BOP1
Names
block of proliferation 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paramormyrops kingsleyae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PKINGS_0.1

Genomic

  1. NW_019711899.1 Reference PKINGS_0.1

    Range
    1941285..1985866 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023812056.1 → XP_023667824.1  ribosome biogenesis protein BOP1

    UniProtKB/TrEMBL
    A0A3B3Q847
    Related
    ENSPKIP00000002348.1, ENSPKIT00000026292.1
Nucleotide Protein
Heading Accession and Version

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