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ELL2 elongation factor for RNA polymerase II 2 [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111542647, updated on 15-Mar-2024

Summary

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Gene symbol
ELL2
Gene description
elongation factor for RNA polymerase II 2
See related
Ensembl:ENSPTEG00000009659
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
15
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 4 NC_045437.1 (92784883..92862244, complement)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019317174.1 (2282364..2359677, complement)

Chromosome 4 - NC_045437.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111542646 Neighboring gene putative uncharacterized protein encoded by LINC01554 Neighboring gene fatty acid-binding protein 5 pseudogene Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in snRNA transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription elongation factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA polymerase II elongation factor ELL2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045437.1 Reference ASM277652v3

    Range
    92784883..92862244 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023212190.1 → XP_023067958.1  RNA polymerase II elongation factor ELL2 isoform X1

    UniProtKB/TrEMBL
    A0A8C9LK16
    Related
    ENSPTEP00000008505.1, ENSPTET00000012956.1
    Conserved Domains (3) summary
    pfam01690
    Location:384 → 616
    PLRV_ORF5; Potato leaf roll virus readthrough protein
    pfam07303
    Location:532 → 633
    Occludin_ELL; Occludin homology domain
    pfam10390
    Location:11 → 289
    ELL; RNA polymerase II elongation factor ELL

  2. XM_023212191.2 → XP_023067959.1  RNA polymerase II elongation factor ELL2 isoform X2

    UniProtKB/TrEMBL
    A0A8C9GRS5
    Related
    ENSPTEP00000008510.1
    Conserved Domains (3) summary
    pfam01690
    Location:368 → 600
    PLRV_ORF5; Potato leaf roll virus readthrough protein
    pfam07303
    Location:516 → 617
    Occludin_ELL; Occludin homology domain
    pfam10390
    Location:11 → 273
    ELL; RNA polymerase II elongation factor ELL

  3. XM_023212193.1 → XP_023067961.1  RNA polymerase II elongation factor ELL2 isoform X4

    Conserved Domains (3) summary
    pfam01690
    Location:344 → 576
    PLRV_ORF5; Potato leaf roll virus readthrough protein
    pfam07303
    Location:492 → 593
    Occludin_ELL; Occludin homology domain
    pfam10390
    Location:7 → 249
    ELL; RNA polymerase II elongation factor ELL

  4. XM_023212194.1 → XP_023067962.1  RNA polymerase II elongation factor ELL2 isoform X5

    UniProtKB/TrEMBL
    A0A8C9GRT5
    Related
    ENSPTEP00000008514.1, ENSPTET00000012970.1
    Conserved Domains (3) summary
    pfam01690
    Location:329 → 561
    PLRV_ORF5; Potato leaf roll virus readthrough protein
    pfam07303
    Location:477 → 578
    Occludin_ELL; Occludin homology domain
    pfam10390
    Location:5 → 234
    ELL; RNA polymerase II elongation factor ELL

  5. XM_023212192.1 → XP_023067960.1  RNA polymerase II elongation factor ELL2 isoform X3

    UniProtKB/TrEMBL
    A0A8C9GRC2
    Related
    ENSPTEP00000008517.1, ENSPTET00000012975.1
    Conserved Domains (3) summary
    pfam01690
    Location:360 → 592
    PLRV_ORF5; Potato leaf roll virus readthrough protein
    pfam07303
    Location:508 → 609
    Occludin_ELL; Occludin homology domain
    pfam10390
    Location:23 → 265
    ELL; RNA polymerase II elongation factor ELL
Nucleotide Protein
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