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LOC111247528 parafibromin-like [ Varroa destructor (honeybee mite) ]

Gene ID: 111247528, updated on 11-Apr-2024

Summary

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Gene symbol
LOC111247528
Gene description
parafibromin-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Varroa destructor
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Mesostigmata; Gamasina; Dermanyssoidea; Varroidae; Varroa
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Genomic context

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See LOC111247528 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Vdes_3.0 (GCF_002443255.1) Unplaced Scaffold NW_019211456.1 (43973702..43977956)

NW_019211456.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 135-like Neighboring gene heterogeneous nuclear ribonucleoprotein Q-like Neighboring gene methylthioribulose-1-phosphate dehydratase-like Neighboring gene parafibromin-like Neighboring gene uncharacterized RNA-binding protein P16F5.06-like Neighboring gene CCR4-NOT transcription complex subunit 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019211456 Unplaced Scaffold Reference Vdes_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cdc73/Paf1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
parafibromin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Varroa destructor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vdes_3.0 Primary Assembly

Genomic

  1. NW_019211456.1 Reference Vdes_3.0 Primary Assembly

    Range
    43973702..43977956
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022798554.1 → XP_022654289.1  parafibromin-like

    UniProtKB/TrEMBL
    A0A7M7JPI7
    Conserved Domains (2) summary
    pfam05179
    Location:366 → 519
    CDC73_C; RNA pol II accessory factor, Cdc73 family, C-terminal
    pfam16050
    Location:1 → 298
    CDC73_N; Paf1 complex subunit CDC73 N-terminal
Nucleotide Protein
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