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elac1 elaC ribonuclease Z 1 [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 111190985, updated on 15-Mar-2024

Summary

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Gene symbol
elac1
Gene description
elaC ribonuclease Z 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 22
Exon count:
3
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 22 NC_064429.1 (12788931..12792122, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) Unplaced Scaffold NW_019172824.1 (6498678..6501844)

Chromosome 22 - NC_064429.1Genomic Context describing neighboring genes Neighboring gene sperm-tail PG-rich repeat containing 2 Neighboring gene SMAD family member 4b Neighboring gene malic enzyme 2, NAD(+)-dependent, mitochondrial Neighboring gene uncharacterized LOC125787040 Neighboring gene amphiregulin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-tRNA processing endoribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc phosphodiesterase ELAC protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064429.1 Reference AstMex3_surface

    Range
    12788931..12792122 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022664839.2 → XP_022520560.2  zinc phosphodiesterase ELAC protein 1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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