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ATE1 arginyltransferase 1 [ Homo sapiens (human) ]

Gene ID: 11101, updated on 25-Nov-2025
Official Symbol
ATE1provided by HGNC
Official Full Name
arginyltransferase 1provided by HGNC
Primary source
HGNC:HGNC:782
See related
Ensembl:ENSG00000107669 MIM:607103; AllianceGenome:HGNC:782
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
This gene encodes an arginyltransferase, an enzyme that is involved in posttranslational conjugation of arginine to N-terminal aspartate or glutamate residues. Conjugation of arginine to the N-terminal aspartate or glutamate targets proteins for ubiquitin-dependent degradation. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2013]
Expression
Ubiquitous expression in thyroid (RPKM 8.9), testis (RPKM 7.9) and 25 other tissues See more
Orthologs
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See ATE1 in Genome Data Viewer
Location:
10q26.13
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2025_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (121740424..121928463, complement)
RS_2025_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (122636555..122824802, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (123499939..123687978, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:123383269-123383770 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:123383771-123384270 Neighboring gene uncharacterized LOC107984183 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:123403785-123404286 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:123427853-123428402 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:123428403-123428952 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:123441905-123442847 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:123455553-123456052 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:123455051-123455552 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:123492224-123492816 Neighboring gene ribosomal protein S15a pseudogene 5 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4140 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4141 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:123687446-123688312 Neighboring gene Sharpr-MPRA regulatory region 2750 Neighboring gene ATE1 opposite strand, pseudogene Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr10:123734371-123735166 Neighboring gene uncharacterized LOC124902517 Neighboring gene NSE4A component of SMC5/6 complex Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr10:123778189-123779388 Neighboring gene transforming acidic coiled-coil containing protein 2 Neighboring gene Sharpr-MPRA regulatory region 10515 Neighboring gene Sharpr-MPRA regulatory regions 8460 and 2354 Neighboring gene MPRA-validated peak1120 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:123836619-123837120 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:123844981-123845482 Neighboring gene Sharpr-MPRA regulatory regions 1076 and 11287 Neighboring gene uncharacterized LOC124902518 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:123914119-123915090

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

EBI GWAS Catalog

Description
Novel breast cancer susceptibility locus at 9q31.2: results of a genome-wide association study.
EBI GWAS Catalog
Products Interactant Other Gene Complex Source Pubs Description

Markers

Clone Names

  • MGC26724

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables arginyl-tRNA--protein transferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables arginyl-tRNA--protein transferase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables arginyl-tRNA--protein transferase activity IEA
Inferred from Electronic Annotation
more info
 
enables arginyl-tRNA--protein transferase activity TAS
Traceable Author Statement
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleoplasm IDA
Inferred from Direct Assay
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
arginyl-tRNA--protein transferase 1
Names
R-transferase 1
arginine-tRNA--protein transferase 1
arginyl-tRNA-protein transferase
NP_001001976.1
NP_001275663.1
NP_001275664.1
NP_001275665.1
NP_001424348.1
NP_001426290.1
NP_001426291.1
NP_001426292.1
NP_001426293.1
NP_001426294.1
NP_001426295.1
NP_001426296.1
NP_001426297.1
NP_001426298.1
NP_001426299.1
NP_001426300.1
NP_001426301.1
NP_001426302.1
NP_001426303.1
NP_001426304.1
NP_001426305.1
NP_001426306.1
NP_001426307.1
NP_001426308.1
NP_001426309.1
NP_001426310.1
NP_001426311.1
NP_001426312.1
NP_001426314.1
NP_001426315.1
NP_008972.2
XP_016871086.2
XP_016871090.2
XP_016871092.2
XP_047280482.1
XP_047280483.1
XP_047280484.1
XP_047280486.1
XP_047280491.1
XP_054220607.1
XP_054220614.1
XP_054220615.1
XP_054220616.1
XP_054220619.1
XP_054220624.1
XP_054220625.1
XP_054220626.1
XP_054220627.1
XP_054220628.1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001001976.3NP_001001976.1  arginyl-tRNA--protein transferase 1 isoform 1

    See identical proteins and their annotated locations for NP_001001976.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) encodes isoform 1.
    Source sequence(s)
    AC025947, AL731542, AL731566
    Consensus CDS
    CCDS31300.1
    UniProtKB/Swiss-Prot
    O95260, O95261, Q5SQQ3, Q8WW04
    UniProtKB/TrEMBL
    A0A8I5KNV5
    Related
    ENSP00000224652.6, ENST00000224652.12
    Conserved Domains (2) summary
    pfam04376
    Location:2192
    ATE_N; Arginine-tRNA-protein transferase, N terminus
    pfam04377
    Location:290431
    ATE_C; Arginine-tRNA-protein transferase, C terminus
  2. NM_001288734.2NP_001275663.1  arginyl-tRNA--protein transferase 1 isoform 3

    See identical proteins and their annotated locations for NP_001275663.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (3) differs in its 5' UTR and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (3) has a shorter N-terminus, compared to isoform 1.
    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5QKV3, B4DK25
    Conserved Domains (1) summary
    pfam04377
    Location:175316
    ATE_C; Arginine-tRNA-protein transferase, C terminus
  3. NM_001288735.2NP_001275664.1  arginyl-tRNA--protein transferase 1 isoform 4

    See identical proteins and their annotated locations for NP_001275664.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (4) differs in its 5' UTR, initiates translation at a downstream start codon, and uses an alternate in-frame exon in the central coding region, compared to variant 1. The encoded isoform (4) has a shorter N-terminus and a unique internal segment, compared to isoform 1.
    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5QKV3, B4E107
    Related
    ENSP00000509714.1, ENST00000693276.1
    Conserved Domains (1) summary
    pfam04377
    Location:198335
    ATE_C; Arginine-tRNA-protein transferase, C terminus
  4. NM_001288736.2NP_001275665.1  arginyl-tRNA--protein transferase 1 isoform 5

    Status: REVIEWED

    Description
    Transcript Variant: This variant (5) differs in the 5' UTR and coding region, and uses an alternate in-frame exon in the central coding region, compared to variant 1. The encoded isoform (5) has a shorter and distinct N-terminus and a unique internal segment, compared to isoform 1.
    Source sequence(s)
    AC025947, AL731542, AL731566
    Consensus CDS
    CCDS73213.1
    UniProtKB/TrEMBL
    B4DR48, F5GXE4
    Related
    ENSP00000440881.1, ENST00000540606.7
    Conserved Domains (2) summary
    pfam04376
    Location:1485
    ATE_N; Arginine-tRNA-protein transferase, N terminus
    pfam04377
    Location:287424
    ATE_C; Arginine-tRNA-protein transferase, C terminus
  5. NM_001437419.1NP_001424348.1  arginyl-tRNA--protein transferase 1 isoform 6

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5KWA6, A0A8I5KZ24
    Related
    ENSP00000510433.1, ENST00000690355.1
  6. NM_001439361.1NP_001426290.1  arginyl-tRNA--protein transferase 1 isoform 8

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5KNV5
  7. NM_001439362.1NP_001426291.1  arginyl-tRNA--protein transferase 1 isoform 9

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    B4DR48
  8. NM_001439363.1NP_001426292.1  arginyl-tRNA--protein transferase 1 isoform 10

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5KWA6
  9. NM_001439364.1NP_001426293.1  arginyl-tRNA--protein transferase 1 isoform 11

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5KNV5
  10. NM_001439365.1NP_001426294.1  arginyl-tRNA--protein transferase 1 isoform 12

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5KWA6
  11. NM_001439366.1NP_001426295.1  arginyl-tRNA--protein transferase 1 isoform 13

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5KS65
    Related
    ENSP00000509487.1, ENST00000689393.1
  12. NM_001439367.1NP_001426296.1  arginyl-tRNA--protein transferase 1 isoform 14

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5KNV5
    Related
    ENSP00000508420.1, ENST00000691573.1
  13. NM_001439368.1NP_001426297.1  arginyl-tRNA--protein transferase 1 isoform 15

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5KNV5, A0A8I5KTH0, B4DR48
    Related
    ENSP00000509590.1, ENST00000689571.1
  14. NM_001439369.1NP_001426298.1  arginyl-tRNA--protein transferase 1 isoform 16

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5KT53
    Related
    ENSP00000574109.1, ENST00000904050.1
  15. NM_001439370.1NP_001426299.1  arginyl-tRNA--protein transferase 1 isoform 17

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5KWA6
    Related
    ENSP00000509363.1, ENST00000691765.1
  16. NM_001439371.1NP_001426300.1  arginyl-tRNA--protein transferase 1 isoform 18

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5KWA6, A0A8I5KZ28
    Related
    ENSP00000510446.1, ENST00000688057.1
  17. NM_001439372.1NP_001426301.1  arginyl-tRNA--protein transferase 1 isoform 19

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5KNT9, A0A8I5KT53
    Related
    ENSP00000508433.1, ENST00000687583.1
  18. NM_001439373.1NP_001426302.1  arginyl-tRNA--protein transferase 1 isoform 20

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5KNV5, A0A8I5KS65
  19. NM_001439374.1NP_001426303.1  arginyl-tRNA--protein transferase 1 isoform 21

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    B4DR48
    Related
    ENSP00000509670.1, ENST00000690773.1
  20. NM_001439375.1NP_001426304.1  arginyl-tRNA--protein transferase 1 isoform 22

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5KT53
  21. NM_001439376.1NP_001426305.1  arginyl-tRNA--protein transferase 1 isoform 23

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5KT53, F8WAC9
    Related
    ENSP00000358036.4, ENST00000369040.9
  22. NM_001439377.1NP_001426306.1  arginyl-tRNA--protein transferase 1 isoform 24

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    B4DR48
  23. NM_001439378.1NP_001426307.1  arginyl-tRNA--protein transferase 1 isoform 25

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5KT53
  24. NM_001439379.1NP_001426308.1  arginyl-tRNA--protein transferase 1 isoform 26

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5KT53
  25. NM_001439380.1NP_001426309.1  arginyl-tRNA--protein transferase 1 isoform 27

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5QKV3
  26. NM_001439381.1NP_001426310.1  arginyl-tRNA--protein transferase 1 isoform 28

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5KNV5
  27. NM_001439382.1NP_001426311.1  arginyl-tRNA--protein transferase 1 isoform 29

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5QKV3
  28. NM_001439383.1NP_001426312.1  arginyl-tRNA--protein transferase 1 isoform 30

    Status: REVIEWED

    Source sequence(s)
    AL731542, AL731566
  29. NM_001439385.1NP_001426314.1  arginyl-tRNA--protein transferase 1 isoform 31

    Status: REVIEWED

    Source sequence(s)
    AC025947, AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5QKV3
  30. NM_001439386.1NP_001426315.1  arginyl-tRNA--protein transferase 1 isoform 7

    Status: REVIEWED

    Source sequence(s)
    AL731542, AL731566
    UniProtKB/TrEMBL
    A0A8I5KVF5
    Related
    ENSP00000509863.1, ENST00000687251.1
  31. NM_007041.4NP_008972.2  arginyl-tRNA--protein transferase 1 isoform 2

    See identical proteins and their annotated locations for NP_008972.2

    Status: REVIEWED

    Description
    Transcript Variant: This variant (2) uses an alternate in-frame exon in the central coding region, compared to variant 1. The encoded isoform (2) is the same length as isoform 1 but has a unique internal segment.
    Source sequence(s)
    AC025947, AL731542, AL731566
    Consensus CDS
    CCDS31299.1
    UniProtKB/TrEMBL
    A0A8I5KT53
    Related
    ENSP00000358039.3, ENST00000369043.8
    Conserved Domains (2) summary
    pfam04376
    Location:2192
    ATE_N; Arginine-tRNA-protein transferase, N terminus
    pfam04377
    Location:294431
    ATE_C; Arginine-tRNA-protein transferase, C terminus

RNA

  1. NR_110006.2 RNA Sequence

    Status: REVIEWED

    Description
    Transcript Variant: This variant (6) uses an alternate 5'-terminal exon and lacks two internal exons, compared to variant 1. This variant is represented as non-coding because the predicted protein does not meet RefSeq quality criteria.
    Source sequence(s)
    AC025947, AL731542, AL731566
    Related
    ENST00000692718.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2025_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    121740424..121928463 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047424530.1XP_047280486.1  arginyl-tRNA--protein transferase 1 isoform X13

    UniProtKB/TrEMBL
    B4DR48
  2. XM_047424527.1XP_047280483.1  arginyl-tRNA--protein transferase 1 isoform X9

    UniProtKB/TrEMBL
    A0A8I5KNV5
    Related
    ENSP00000510033.1, ENST00000692278.1
  3. XM_017015597.2XP_016871086.2  arginyl-tRNA--protein transferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I5KNV5
  4. XM_047424528.1XP_047280484.1  arginyl-tRNA--protein transferase 1 isoform X10

    UniProtKB/TrEMBL
    A0A8I5KS65
  5. XM_047424526.1XP_047280482.1  arginyl-tRNA--protein transferase 1 isoform X9

    UniProtKB/TrEMBL
    A0A8I5KNV5
  6. XM_017015603.2XP_016871092.2  arginyl-tRNA--protein transferase 1 isoform X19

  7. XM_017015601.3XP_016871090.2  arginyl-tRNA--protein transferase 1 isoform X18

  8. XM_047424535.1XP_047280491.1  arginyl-tRNA--protein transferase 1 isoform X21

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    122636555..122824802 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054364644.1XP_054220619.1  arginyl-tRNA--protein transferase 1 isoform X13

    UniProtKB/TrEMBL
    B4DR48
  2. XM_054364640.1XP_054220615.1  arginyl-tRNA--protein transferase 1 isoform X9

    UniProtKB/TrEMBL
    A0A8I5KNV5
  3. XM_054364632.1XP_054220607.1  arginyl-tRNA--protein transferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I5KNV5
  4. XM_054364641.1XP_054220616.1  arginyl-tRNA--protein transferase 1 isoform X10

    UniProtKB/TrEMBL
    A0A8I5KS65
  5. XM_054364639.1XP_054220614.1  arginyl-tRNA--protein transferase 1 isoform X9

    UniProtKB/TrEMBL
    A0A8I5KNV5
  6. XM_054364650.1XP_054220625.1  arginyl-tRNA--protein transferase 1 isoform X19

  7. XM_054364653.1XP_054220628.1  arginyl-tRNA--protein transferase 1 isoform X26

    UniProtKB/TrEMBL
    A0A8I5KVF5
  8. XM_054364651.1XP_054220626.1  arginyl-tRNA--protein transferase 1 isoform X24

    UniProtKB/TrEMBL
    A0A8I5KWF1
  9. XM_054364649.1XP_054220624.1  arginyl-tRNA--protein transferase 1 isoform X23

  10. XM_054364652.1XP_054220627.1  arginyl-tRNA--protein transferase 1 isoform X25