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Igkj5 immunoglobulin kappa joining 5 [ Mus musculus (house mouse) ]

Gene ID: 110763, updated on 8-Feb-2024

Summary

Official Symbol
Igkj5provided by MGI
Official Full Name
immunoglobulin kappa joining 5provided by MGI
Primary source
MGI:MGI:1316738
See related
Ensembl:ENSMUSG00000076608 IMGT/GENE-DB:IGKJ5; AllianceGenome:MGI:1316738
Gene type
other
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Igk-J5
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Genomic context

See Igkj5 in Genome Data Viewer
Location:
6 C1; 6 32.04 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (70700870..70700907)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (70723886..70723923)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene immunoglobulin kappa chain complex Neighboring gene STARR-positive B cell enhancer ABC_E9273 Neighboring gene STARR-positive B cell enhancer ABC_E11317 Neighboring gene STARR-positive B cell enhancer ABC_E11318 Neighboring gene STARR-positive B cell enhancer ABC_E2193 Neighboring gene STARR-positive B cell enhancer mm9_chr6:70694043-70694344 Neighboring gene predicted gene, 30211 Neighboring gene immunoglobulin kappa joining 3 Neighboring gene immunoglobulin kappa joining 4 Neighboring gene immunoglobulin kappa constant

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Other Names

  • immunoglobulin kappa chain, joining region, 2
  • immunoglobulin kappa chain, joining region, 5

Gene Ontology Provided by MGI

Process Evidence Code Pubs
involved_in B cell differentiation IGI
Inferred from Genetic Interaction
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_005612.1 

    Range
    3168906..3168943
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    70700870..70700907
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)