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LOC110339217 peflin-like [ Mesocricetus auratus (golden hamster) ]

Gene ID: 110339217, updated on 16-Nov-2023

Summary

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Gene symbol
LOC110339217
Gene description
peflin-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
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Genomic context

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See LOC110339217 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429266.1 (27138222..27286010)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801631.1 (13455885..13468432, complement)

NW_024429266.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106021217 Neighboring gene lymphotactin Neighboring gene uncharacterized LOC121136740 Neighboring gene dermatopontin Neighboring gene uncharacterized LOC121137050 Neighboring gene uncharacterized LOC121137049 Neighboring gene uncharacterized LOC110341095

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in COPII vesicle coating IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: peflin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429266.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    27138222..27286010
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040737723.1 → XP_040593657.1  LOW QUALITY PROTEIN: peflin-like

    Conserved Domains (1) summary
    cd16184
    Location:109 → 274
    EFh_PEF_peflin; EF-hand, calcium binding motif, found in peflin and similar proteins
Nucleotide Protein
Heading Accession and Version

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