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PRKAR2B protein kinase cAMP-dependent type II regulatory subunit beta [ Sus scrofa (pig) ]

Gene ID: 110262251, updated on 17-Aug-2024

Summary

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Official Symbol
PRKAR2Bprovided by VGNC
Official Full Name
protein kinase cAMP-dependent type II regulatory subunit betaprovided by VGNC
Primary source
VGNC:VGNC:91805
See related
Ensembl:ENSSSCG00000037706
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Broad expression in subcutaneous adipose (RPKM 124.4), spleen (RPKM 37.7) and 5 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
11
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 9 NC_010451.4 (106851044..106957519)

Chromosome 9 - NC_010451.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110255501 Neighboring gene 39S ribosomal protein L22, mitochondrial pseudogene Neighboring gene uncharacterized LOC110262252 Neighboring gene HMG-box transcription factor 1 Neighboring gene component of oligomeric golgi complex 5 Neighboring gene G protein-coupled receptor 22

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010451.4 Chromosome 9 Reference Sscrofa11.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
  2. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cAMP-dependent protein kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cAMP-dependent protein kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cAMP-dependent protein kinase type II-beta regulatory subunit
Names
protein kinase, cAMP-dependent, regulatory, type II, beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010451.4 Reference Sscrofa11.1 Primary Assembly

    Range
    106851044..106957519
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021102599.1 → XP_020958258.1  cAMP-dependent protein kinase type II-beta regulatory subunit

    UniProtKB/TrEMBL
    A0A4X1V1T6, A0A8D1S117
    Related
    ENSSSCP00000033101.3, ENSSSCT00000059105.3
    Conserved Domains (2) summary
    cd12104
    Location:3 → 43
    DD_RIIbeta_PKA; Dimerization/Docking domain of the Type II beta Regulatory subunit of cAMP-dependent protein kinase
    cd00038
    Location:275 → 395
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
Nucleotide Protein
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