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GNPDA1 glucosamine-6-phosphate deaminase 1 [ Phascolarctos cinereus (koala) ]

Gene ID: 110220896, updated on 15-Mar-2024

Summary

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Gene symbol
GNPDA1
Gene description
glucosamine-6-phosphate deaminase 1
See related
Ensembl:ENSPCIG00000029876
Gene type
protein coding
RefSeq status
MODEL
Organism
Phascolarctos cinereus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
Orthologs
human mouse all
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Genomic context

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See GNPDA1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018344059.1 (3163163..3203022)

NW_018344059.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110220932 Neighboring gene cytochrome c oxidase subunit NDUFA4 pseudogene Neighboring gene Nedd4 family interacting protein 1 Neighboring gene ring finger protein 14 Neighboring gene protocadherin 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018344059 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucosamine-6-phosphate deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucosamine-6-phosphate isomerase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference phaCin_unsw_v4.1 Primary Assembly

Genomic

  1. NW_018344059.1 Reference phaCin_unsw_v4.1 Primary Assembly

    Range
    3163163..3203022
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021005153.1 → XP_020860812.1  glucosamine-6-phosphate isomerase 1

    UniProtKB/TrEMBL
    A0A6P5LQT3
    Conserved Domains (1) summary
    PRK00443
    Location:1 → 258
    nagB; glucosamine-6-phosphate deaminase; Provisional

  2. XM_021005155.1 → XP_020860814.1  glucosamine-6-phosphate isomerase 1

    UniProtKB/TrEMBL
    A0A6P5LQT3
    Conserved Domains (1) summary
    PRK00443
    Location:1 → 258
    nagB; glucosamine-6-phosphate deaminase; Provisional

  3. XM_021005152.1 → XP_020860811.1  glucosamine-6-phosphate isomerase 1

    UniProtKB/TrEMBL
    A0A6P5LQT3
    Related
    ENSPCIP00000040829.1, ENSPCIT00000050288.2
    Conserved Domains (1) summary
    PRK00443
    Location:1 → 258
    nagB; glucosamine-6-phosphate deaminase; Provisional

  4. XM_021005154.1 → XP_020860813.1  glucosamine-6-phosphate isomerase 1

    UniProtKB/TrEMBL
    A0A6P5LQT3
    Related
    ENSPCIP00000040831.1, ENSPCIT00000050290.2
    Conserved Domains (1) summary
    PRK00443
    Location:1 → 258
    nagB; glucosamine-6-phosphate deaminase; Provisional
Nucleotide Protein
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