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SRP54 signal recognition particle 54 [ Phascolarctos cinereus (koala) ]

Gene ID: 110211800, updated on 15-Mar-2024

Summary

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Gene symbol
SRP54
Gene description
signal recognition particle 54
See related
Ensembl:ENSPCIG00000016175
Gene type
protein coding
RefSeq status
MODEL
Organism
Phascolarctos cinereus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018343993.1 (17641512..17696566, complement)

NW_018343993.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S10 pseudogene Neighboring gene family with sequence similarity 177 member A1 Neighboring gene uncharacterized LOC110211803

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018343993 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 7S RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables endoplasmic reticulum signal peptide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SRP-dependent cotranslational protein targeting to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in SRP-dependent cotranslational protein targeting to membrane, translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of signal recognition particle, endoplasmic reticulum targeting IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
signal recognition particle 54 kDa protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference phaCin_unsw_v4.1 Primary Assembly

Genomic

  1. NW_018343993.1 Reference phaCin_unsw_v4.1 Primary Assembly

    Range
    17641512..17696566 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020991392.1 → XP_020847051.1  signal recognition particle 54 kDa protein

    UniProtKB/TrEMBL
    A0A6P5KN55
    Related
    ENSPCIP00000021322.1, ENSPCIT00000026306.2
    Conserved Domains (1) summary
    TIGR01425
    Location:2 → 430
    SRP54_euk; signal recognition particle protein SRP54

  2. XM_020991391.1 → XP_020847050.1  signal recognition particle 54 kDa protein

    UniProtKB/TrEMBL
    A0A6P5KN55
    Conserved Domains (1) summary
    TIGR01425
    Location:2 → 430
    SRP54_euk; signal recognition particle protein SRP54
Nucleotide Protein
Heading Accession and Version

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