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RO60 Ro60, Y RNA binding protein [ Phascolarctos cinereus (koala) ]

Gene ID: 110206892, updated on 15-Mar-2024

Summary

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Gene symbol
RO60
Gene description
Ro60, Y RNA binding protein
See related
Ensembl:ENSPCIG00000028632
Gene type
protein coding
RefSeq status
MODEL
Organism
Phascolarctos cinereus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
Also known as
TROVE2
Orthologs
human mouse all
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Genomic context

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See RO60 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018343968.1 (20589547..20627885)

NW_018343968.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110206747 Neighboring gene ubiquitin C-terminal hydrolase L5 Neighboring gene glutaredoxin 2 Neighboring gene cell division cycle 73 Neighboring gene beta-1,3-galactosyltransferase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018343968 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60 kDa SS-A/Ro ribonucleoprotein
Names
TROVE domain family member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference phaCin_unsw_v4.1 Primary Assembly

Genomic

  1. NW_018343968.1 Reference phaCin_unsw_v4.1 Primary Assembly

    Range
    20589547..20627885
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020984437.1 → XP_020840096.1  60 kDa SS-A/Ro ribonucleoprotein isoform X1

    UniProtKB/TrEMBL
    A0A6P5K4E6
    Related
    ENSPCIP00000038957.1, ENSPCIT00000047983.2
    Conserved Domains (2) summary
    cd00198
    Location:372 → 487
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam05731
    Location:16 → 369
    TROVE; TROVE domain

  2. XM_020984436.1 → XP_020840095.1  60 kDa SS-A/Ro ribonucleoprotein isoform X1

    UniProtKB/TrEMBL
    A0A6P5K4E6
    Related
    ENSPCIP00000038958.1, ENSPCIT00000047984.2
    Conserved Domains (2) summary
    cd00198
    Location:372 → 487
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam05731
    Location:16 → 369
    TROVE; TROVE domain

  3. XM_020984438.1 → XP_020840097.1  60 kDa SS-A/Ro ribonucleoprotein isoform X2

    UniProtKB/TrEMBL
    A0A6P5K514
    Conserved Domains (2) summary
    cd00198
    Location:372 → 487
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam05731
    Location:16 → 369
    TROVE; TROVE domain

  4. XM_020984439.1 → XP_020840098.1  60 kDa SS-A/Ro ribonucleoprotein isoform X3

    UniProtKB/TrEMBL
    A0A6P5K446
    Conserved Domains (2) summary
    cd00198
    Location:191 → 306
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    pfam05731
    Location:17 → 188
    TROVE; TROVE domain
Nucleotide Protein
Heading Accession and Version

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