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eif3ba eukaryotic translation initiation factor 3, subunit Ba [ Rhincodon typus (whale shark) ]

Gene ID: 109910408, updated on 14-Mar-2024

Summary

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Gene symbol
eif3ba
Gene description
eukaryotic translation initiation factor 3, subunit Ba
See related
EnsemblRapid:ENSRTYG00015002159
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhincodon typus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Orectolobiformes; Rhincodontidae; Rhincodon
Also known as
eif3b
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 21
Exon count:
19
Annotation release Status Assembly Chr Location
101 current sRhiTyp1.1 (GCF_021869965.1) 21 NC_063352.1 (50401418..50465920, complement)
100 previous assembly ASM164234v2 (GCF_001642345.1) Unplaced Scaffold NW_018029632.1 (217486..281043, complement)

Chromosome 21 - NC_063352.1Genomic Context describing neighboring genes Neighboring gene tweety family member 3a Neighboring gene kinesin-like protein KIF19 Neighboring gene BRCA1-associated ATM activator 1 Neighboring gene zinc finger protein 598

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of eukaryotic translation initiation factor 3 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 3, subunit Ba
Names
eukaryotic translation initiation factor 3 subunit B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhincodon typus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sRhiTyp1.1

Genomic

  1. NC_063352.1 Reference sRhiTyp1.1

    Range
    50401418..50465920 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020509582.2 → XP_020365171.1  eukaryotic translation initiation factor 3, subunit Ba

    Related
    ENSRTYP00015003321.1, ENSRTYT00015003627.1
    Conserved Domains (3) summary
    cd12278
    Location:58 → 138
    RRM_eIF3B; RNA recognition motif in eukaryotic translation initiation factor 3 subunit B (eIF-3B) and similar proteins
    sd00039
    Location:250 → 297
    7WD40; WD40 repeat [structural motif]
    cl25541
    Location:183 → 686
    eIF2A; Eukaryotic translation initiation factor eIF2A
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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