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CNBP CCHC-type zinc finger nucleic acid binding protein [ Panthera pardus (leopard) ]

Gene ID: 109256033, updated on 14-Mar-2024

Summary

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Gene symbol
CNBP
Gene description
CCHC-type zinc finger nucleic acid binding protein
See related
Ensembl:ENSPPRG00000003431
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera pardus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_02 current ASM2436296v1 (GCF_024362965.1) Unplaced Scaffold NW_026527013.1 (57297719..57308397, complement)
100 previous assembly PanPar1.0 (GCF_001857705.1) Unplaced Scaffold NW_017619980.1 (507405..518230, complement)

NW_026527013.1Genomic Context describing neighboring genes Neighboring gene ISY1 splicing factor homolog Neighboring gene uncharacterized LOC128775546 Neighboring gene uncharacterized LOC128775487 Neighboring gene U6 spliceosomal RNA Neighboring gene COPI coat complex subunit gamma 1 Neighboring gene 5-hydroxymethylcytosine binding, ES cell specific

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CCHC-type zinc finger nucleic acid binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024362965.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2436296v1 Primary Assembly

Genomic

  1. NW_026527013.1 Reference ASM2436296v1 Primary Assembly

    Range
    57297719..57308397 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019430949.2 → XP_019286494.1  CCHC-type zinc finger nucleic acid binding protein isoform X3

    UniProtKB/TrEMBL
    A0A9V1EQP3
    Conserved Domains (1) summary
    PTZ00368
    Location:47 → 165
    PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional

  2. XM_019430946.2 → XP_019286491.1  CCHC-type zinc finger nucleic acid binding protein isoform X1

    UniProtKB/TrEMBL
    A0A9V1EQV8
    Related
    ENSPPRP00000008712.1
    Conserved Domains (1) summary
    PTZ00368
    Location:54 → 172
    PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional

  3. XM_019430950.2 → XP_019286495.1  CCHC-type zinc finger nucleic acid binding protein isoform X4

    UniProtKB/TrEMBL
    A0A9V1ER79
    Conserved Domains (1) summary
    PTZ00368
    Location:47 → 164
    PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional

  4. XM_019430948.2 → XP_019286493.1  CCHC-type zinc finger nucleic acid binding protein isoform X2

    UniProtKB/TrEMBL
    A0A9V1EQU1
    Conserved Domains (1) summary
    PTZ00368
    Location:54 → 171
    PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
Nucleotide Protein
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