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ZMAT5 zinc finger matrin-type 5 [ Panthera pardus (leopard) ]

Gene ID: 109253570, updated on 14-Mar-2024

Summary

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Gene symbol
ZMAT5
Gene description
zinc finger matrin-type 5
See related
Ensembl:ENSPPRG00000016453
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera pardus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current ASM2436296v1 (GCF_024362965.1) Unplaced Scaffold NW_026526710.1 (17228070..17255035)
100 previous assembly PanPar1.0 (GCF_001857705.1) Unplaced Scaffold NW_017619951.1 (4539021..4566158, complement)

NW_026526710.1Genomic Context describing neighboring genes Neighboring gene activating signal cointegrator 1 complex subunit 2 Neighboring gene cytochrome b-c1 complex subunit 9 Neighboring gene calcium binding protein 7 Neighboring gene NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U12-type spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger matrin-type protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024362965.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2436296v1 Primary Assembly

Genomic

  1. NW_026526710.1 Reference ASM2436296v1 Primary Assembly

    Range
    17228070..17255035
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019426622.2 → XP_019282167.1  zinc finger matrin-type protein 5

    UniProtKB/TrEMBL
    A0A9V1EHZ7
    Related
    ENSPPRP00000025994.1
    Conserved Domains (2) summary
    cl22907
    Location:5 → 46
    zf-U1; U1 zinc finger
    pfam00642
    Location:55 → 76
    zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

  2. XM_019426623.2 → XP_019282168.1  zinc finger matrin-type protein 5

    UniProtKB/TrEMBL
    A0A9V1EHZ7
    Conserved Domains (2) summary
    cl22907
    Location:5 → 46
    zf-U1; U1 zinc finger
    pfam00642
    Location:55 → 76
    zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

  3. XM_019426624.2 → XP_019282169.1  zinc finger matrin-type protein 5

    UniProtKB/TrEMBL
    A0A9V1EHZ7
    Conserved Domains (2) summary
    cl22907
    Location:5 → 46
    zf-U1; U1 zinc finger
    pfam00642
    Location:55 → 76
    zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Nucleotide Protein
Heading Accession and Version

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