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LOC109081296 soluble guanylate cyclase 88E-like [ Cyprinus carpio (common carp) ]

Gene ID: 109081296, updated on 11-Apr-2024

Summary

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Gene symbol
LOC109081296
Gene description
soluble guanylate cyclase 88E-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
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Genomic context

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Location:
chromosome: B14
Exon count:
19
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) B14 NC_056610.1 (8752852..8763366)
100 previous assembly common carp genome (GCF_000951615.1) Unplaced Scaffold NW_017542473.1 (134241..143382)

Chromosome B14 - NC_056610.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA synthetase long chain family member 1b Neighboring gene myozenin-2-like Neighboring gene ADP-ribosylation factor-like protein 3 Neighboring gene uncharacterized LOC109081303

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanylate cyclase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxygen sensor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nitric oxide-cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to oxygen levels IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of guanylate cyclase complex, soluble IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: soluble guanylate cyclase 88E-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056610.1 Reference ASM1834038v1 Primary Assembly

    Range
    8752852..8763366
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042737960.1 → XP_042593894.1  LOW QUALITY PROTEIN: soluble guanylate cyclase 88E-like

    UniProtKB/TrEMBL
    A0A8C1JWF9, A0A9J7XMC4, A0A9Q9X285
    Conserved Domains (1) summary
    smart00044
    Location:415 → 607
    CYCc; Adenylyl- / guanylyl cyclase, catalytic domain
Nucleotide Protein
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