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Ciapin1 cytokine induced apoptosis inhibitor 1 [ Mus musculus (house mouse) ]

Gene ID: 109006, updated on 2-Oct-2018

Summary

Official Symbol
Ciapin1provided by MGI
Official Full Name
cytokine induced apoptosis inhibitor 1provided by MGI
Primary source
MGI:MGI:1922083
See related
Ensembl:ENSMUSG00000031781 Vega:OTTMUSG00000027367
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AA617265; AU021794; anamorsin; 2810413N20Rik
Expression
Ubiquitous expression in whole brain E14.5 (RPKM 7.5), CNS E14 (RPKM 7.3) and 28 other tissues See more
Orthologs

Genomic context

See Ciapin1 in Genome Data Viewer
Location:
8; 8 C5
Exon count:
9
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 8 NC_000074.6 (94819818..94838372, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (97343718..97362240, complement)

Chromosome 8 - NC_000074.6Genomic Context describing neighboring genes Neighboring gene chemokine (C-X3-C motif) ligand 1 Neighboring gene chemokine (C-C motif) ligand 17 Neighboring gene ribosomal protein L7A pseudogene Neighboring gene coenzyme Q9 Neighboring gene polymerase (RNA) II (DNA directed) polypeptide C Neighboring gene docking protein 4

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Homology

Clone Names

  • MGC29983

Gene Ontology Provided by MGI

Function Evidence Code Pubs
2 iron, 2 sulfur cluster binding ISO
Inferred from Sequence Orthology
more info
 
4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 
iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
apoptotic process IEA
Inferred from Electronic Annotation
more info
 
hemopoiesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
iron-sulfur cluster assembly IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
negative regulation of apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
mitochondrion ISO
Inferred from Sequence Orthology
more info
 
nucleolus IDA
Inferred from Direct Assay
more info
PubMed 
nucleolus ISO
Inferred from Sequence Orthology
more info
 
nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
anamorsin
Names
fe-S cluster assembly protein DRE2 homolog

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_134141.4NP_598902.1  anamorsin

    See identical proteins and their annotated locations for NP_598902.1

    Status: VALIDATED

    Source sequence(s)
    AC129606
    Consensus CDS
    CCDS22549.1
    UniProtKB/Swiss-Prot
    Q8WTY4
    UniProtKB/TrEMBL
    F8WIK0
    Related
    ENSMUSP00000125451.1, OTTMUSP00000034085, ENSMUST00000162538.8, OTTMUST00000067672
    Conserved Domains (2) summary
    pfam05093
    Location:233301
    CIAPIN1; Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis
    cl17173
    Location:2695
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000074.6 Reference GRCm38.p4 C57BL/6J

    Range
    94819818..94838372 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006530560.1XP_006530623.1  anamorsin isoform X1

    See identical proteins and their annotated locations for XP_006530623.1

    UniProtKB/Swiss-Prot
    Q8WTY4
    UniProtKB/TrEMBL
    F8WIK0
    Related
    ENSMUSP00000034233.8, OTTMUSP00000034731, ENSMUST00000034233.14, OTTMUST00000068616
    Conserved Domains (2) summary
    pfam05093
    Location:233301
    CIAPIN1; Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis
    cl17173
    Location:2695
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

RNA

  1. XR_001778391.1 RNA Sequence

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