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cadm3 cell adhesion molecule 3 [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108937835, updated on 14-Mar-2024

Summary

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Gene symbol
cadm3
Gene description
cell adhesion molecule 3
See related
Ensembl:ENSSFOG00015032256
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Orthologs
human zebrafish all
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Genomic context

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See cadm3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 1 NC_041806.1 (16128897..16161702)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017372011.1 (1186715..1224621, complement)

Chromosome 1 - NC_041806.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon UCU) Neighboring gene succinate dehydrogenase complex, subunit C, integral membrane protein Neighboring gene kirre like nephrin family adhesion molecule 1b Neighboring gene high affinity immunoglobulin epsilon receptor subunit gamma-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in presynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cell adhesion molecule 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041806.1 Reference fSclFor1.1 Primary Assembly

    Range
    16128897..16161702
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029253362.1 → XP_029109195.1  cell adhesion molecule 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C9VRQ0
    Related
    ENSSFOP00015064183.1, ENSSFOT00015039478.1
    Conserved Domains (3) summary
    smart00294
    Location:373 → 391
    4.1m; putative band 4.1 homologues' binding motif
    pfam13927
    Location:246 → 318
    Ig_3; Immunoglobulin domain
    cl11960
    Location:46 → 140
    Ig; Immunoglobulin domain

  2. XM_029253366.1 → XP_029109199.1  cell adhesion molecule 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C9W110
    Related
    ENSSFOP00015068681.1, ENSSFOT00015079408.1
    Conserved Domains (3) summary
    smart00294
    Location:366 → 384
    4.1m; putative band 4.1 homologues' binding motif
    pfam13927
    Location:246 → 318
    Ig_3; Immunoglobulin domain
    cl11960
    Location:46 → 140
    Ig; Immunoglobulin domain

  3. XM_018758009.2 → XP_018613525.2  cell adhesion molecule 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C9VRQ0
    Conserved Domains (3) summary
    smart00294
    Location:373 → 391
    4.1m; putative band 4.1 homologues' binding motif
    pfam13927
    Location:246 → 318
    Ig_3; Immunoglobulin domain
    cl11960
    Location:46 → 140
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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