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cherp calcium homeostasis endoplasmic reticulum protein [ Scleropages formosus (Asian bonytongue) ]

Gene ID: 108921507, updated on 14-Mar-2024

Summary

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Gene symbol
cherp
Gene description
calcium homeostasis endoplasmic reticulum protein
See related
Ensembl:ENSSFOG00015008022
Gene type
protein coding
RefSeq status
MODEL
Organism
Scleropages formosus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 25
Exon count:
18
Annotation release Status Assembly Chr Location
101 current fSclFor1.1 (GCF_900964775.1) 25 NC_041830.1 (18005135..18011083)
100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371526.1 (301082..306861, complement)

Chromosome 25 - NC_041830.1Genomic Context describing neighboring genes Neighboring gene complexin-4-like Neighboring gene retinal homeobox protein Rx1-like Neighboring gene calreticulin-like Neighboring gene epidermal growth factor receptor substrate 15-like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium homeostasis endoplasmic reticulum protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSclFor1.1 Primary Assembly

Genomic

  1. NC_041830.1 Reference fSclFor1.1 Primary Assembly

    Range
    18005135..18011083
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018730988.2 → XP_018586504.2  calcium homeostasis endoplasmic reticulum protein

    UniProtKB/TrEMBL
    A0A0P7UT47
    Related
    ENSSFOP00015012468.2, ENSSFOT00015012625.2
    Conserved Domains (3) summary
    smart00443
    Location:813 → 863
    G_patch; glycine rich nucleic binding domain
    pfam01805
    Location:11 → 59
    Surp; Surp module
    pfam04818
    Location:205 → 267
    CTD_bind; RNA polymerase II-binding domain
Nucleotide Protein
Heading Accession and Version

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