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arhgap9.S Rho GTPase activating protein 9 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108709860, updated on 11-Apr-2024

Summary

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Official Symbol
arhgap9.S
Official Full Name
Rho GTPase activating protein 9 S homeolog
Primary source
Xenbase:XB-GENE-17341702
Locus tag
XELAEV_18015930mg
See related
EnsemblRapid:ENSXLAG00005024950
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See arhgap9.S in Genome Data Viewer
Location:
chromosome: 2S
Exon count:
20
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2S NC_054374.1 (132190062..132253007, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (123177386..123236736, complement)

Chromosome 2S - NC_054374.1Genomic Context describing neighboring genes Neighboring gene GLI family zinc finger 1 S homeolog Neighboring gene zinc finger E-box-binding homeobox 1-like Neighboring gene methionyl-tRNA synthetase 1 S homeolog Neighboring gene DNA damage inducible transcript 3 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within signal transduction IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
rho GTPase-activating protein 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    132190062..132253007 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041584419.1 → XP_041440353.1  rho GTPase-activating protein 15 isoform X2

    UniProtKB/TrEMBL
    A0A8J1MFP4
    Conserved Domains (4) summary
    cd00201
    Location:214 → 243
    WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
    cd04403
    Location:572 → 758
    RhoGAP_ARHGAP27_15_12_9; GTPase-activator protein (GAP) domain for Rho-like GTPases found in ARHGAP27 (also called CAMGAP1), ARHGAP15, 12 and 9-like proteins; This subgroup of ARHGAPs are multidomain proteins that contain RhoGAP, PH, SH3 and WW domains. Most members that are ...
    cd13233
    Location:378 → 489
    PH_ARHGAP9-like; Beta-spectrin pleckstrin homology (PH) domain
    cl17036
    Location:24 → 80
    SH3; Src Homology 3 domain superfamily

  2. XM_018250078.2 → XP_018105567.1  rho GTPase-activating protein 15 isoform X1

    UniProtKB/TrEMBL
    A0A1L8H9T6, A0A974DIX5
    Related
    ENSXLAP00005073960.1, ENSXLAT00005075525.1

  3. XM_041584420.1 → XP_041440354.1  rho GTPase-activating protein 15 isoform X3

    UniProtKB/TrEMBL
    A0A8J1MF63
    Conserved Domains (3) summary
    cd04403
    Location:496 → 700
    RhoGAP_ARHGAP27_15_12_9; GTPase-activator protein (GAP) domain for Rho-like GTPases found in ARHGAP27 (also called CAMGAP1), ARHGAP15, 12 and 9-like proteins; This subgroup of ARHGAPs are multidomain proteins that contain RhoGAP, PH, SH3 and WW domains. Most members that are ...
    cd13233
    Location:302 → 413
    PH_ARHGAP9-like; Beta-spectrin pleckstrin homology (PH) domain
    cl17036
    Location:24 → 80
    SH3; Src Homology 3 domain superfamily

  4. XM_041584421.1 → XP_041440355.1  rho GTPase-activating protein 15 isoform X4

    UniProtKB/TrEMBL
    A0A8J1MH03
    Conserved Domains (3) summary
    cd04403
    Location:465 → 669
    RhoGAP_ARHGAP27_15_12_9; GTPase-activator protein (GAP) domain for Rho-like GTPases found in ARHGAP27 (also called CAMGAP1), ARHGAP15, 12 and 9-like proteins; This subgroup of ARHGAPs are multidomain proteins that contain RhoGAP, PH, SH3 and WW domains. Most members that are ...
    cd13233
    Location:271 → 382
    PH_ARHGAP9-like; Beta-spectrin pleckstrin homology (PH) domain
    cl17036
    Location:24 → 80
    SH3; Src Homology 3 domain superfamily

  5. XM_041584422.1 → XP_041440356.1  rho GTPase-activating protein 15 isoform X5

    UniProtKB/TrEMBL
    A0A8J1MG53
    Conserved Domains (3) summary
    cd00201
    Location:32 → 61
    WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
    cd04403
    Location:390 → 594
    RhoGAP_ARHGAP27_15_12_9; GTPase-activator protein (GAP) domain for Rho-like GTPases found in ARHGAP27 (also called CAMGAP1), ARHGAP15, 12 and 9-like proteins; This subgroup of ARHGAPs are multidomain proteins that contain RhoGAP, PH, SH3 and WW domains. Most members that are ...
    cd13233
    Location:196 → 307
    PH_ARHGAP9-like; Beta-spectrin pleckstrin homology (PH) domain
Nucleotide Protein Strain
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