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c2h2orf49.S chromosome 2 C2orf49 homolog S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108709712, updated on 17-Aug-2024

Summary

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Official Symbol
c2h2orf49.S
Official Full Name
chromosome 2 C2orf49 homolog S homeolog
Primary source
Xenbase:XB-GENE-17337698
Locus tag
XELAEV_18015521mg
See related
EnsemblRapid:ENSXLAG00005024706
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
asw; asw-a; ashwin; c2orf49; c2orf49.S
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Genomic context

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Location:
chromosome: 2S
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2S NC_054374.1 (102862974..102869069)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (93777513..93783580)

Chromosome 2S - NC_054374.1Genomic Context describing neighboring genes Neighboring gene 28S ribosomal protein S9, mitochondrial-like Neighboring gene G protein-coupled receptor 45 S homeolog Neighboring gene transforming growth factor beta receptor associated protein 1 S homeolog Neighboring gene four and a half LIM domains 2 S homeolog Neighboring gene septin 10 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within embryonic morphogenesis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
part_of tRNA-splicing ligase complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ashwin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    102862974..102869069
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018249788.2 → XP_018105277.1  ashwin-like

    UniProtKB/TrEMBL
    A0A1L8H8U6, A0A974DKJ8
    Related
    ENSXLAP00005073164.1, ENSXLAT00005074731.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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