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card11.L caspase recruitment domain family member 11 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108701496, updated on 11-Apr-2024

Summary

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Official Symbol
card11.L
Official Full Name
caspase recruitment domain family member 11 L homeolog
Primary source
Xenbase:XB-GENE-17331454
Locus tag
XELAEV_18045037mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See card11.L in Genome Data Viewer
Location:
chromosome: 9_10L
Exon count:
25
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (94706239..94764910)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (84126379..84184984)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein with EGF like and two follistatin like domains 2 L homeolog Neighboring gene post-GPI attachment to proteins 1 L homeolog Neighboring gene uncharacterized LOC121398378 Neighboring gene WD repeat domain, phosphoinositide interacting 2 L homeolog Neighboring gene DnaJ heat shock protein family (Hsp40) member B11 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables CARD domain binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
caspase recruitment domain-containing protein 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    94706239..94764910
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041576554.1 → XP_041432488.1  caspase recruitment domain-containing protein 11 isoform X2

    UniProtKB/TrEMBL
    A0A8J1LSF9
    Conserved Domains (4) summary
    COG1196
    Location:129 → 417
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00992
    Location:691 → 763
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl14633
    Location:16 → 100
    DD; Death Domain Superfamily of protein-protein interaction domains
    cl17036
    Location:785 → 850
    SH3; Src Homology 3 domain superfamily

  2. XM_018236247.2 → XP_018091736.1  caspase recruitment domain-containing protein 11 isoform X1

    UniProtKB/TrEMBL
    A0A1L8EX75, A0A974C005
Nucleotide Protein Strain
Heading Accession and Version

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