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LRRC4C leucine rich repeat containing 4C [ Rhinopithecus bieti (black snub-nosed monkey) ]

Gene ID: 108527489, updated on 14-Mar-2024

Summary

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Gene symbol
LRRC4C
Gene description
leucine rich repeat containing 4C
See related
Ensembl:ENSRBIG00000004180
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinopithecus bieti
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
Orthologs
human mouse all
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Genomic context

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See LRRC4C in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM169854v1 (GCF_001698545.1) Unplaced Scaffold NW_016803198.1 (1787891..1970102)

NW_016803198.1Genomic Context describing neighboring genes Neighboring gene la-related protein 4 pseudogene Neighboring gene 60S ribosomal protein L9 pseudogene Neighboring gene zinc finger CCHC domain-containing protein 9 pseudogene Neighboring gene syncytin-1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_016803198.1 Unplaced Scaffold Reference ASM169854v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell-cell adhesion mediator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modulation of chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic membrane adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in glutamatergic synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat-containing protein 4C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinopithecus bieti Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM169854v1 Primary Assembly

Genomic

  1. NW_016803198.1 Reference ASM169854v1 Primary Assembly

    Range
    1787891..1970102
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017868817.1 → XP_017724306.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    A0A2K6JP56
    Conserved Domains (6) summary
    smart00013
    Location:47 → 80
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:301 → 339
    LRRCT; Leucine rich repeat C-terminal domain
    smart00409
    Location:360 → 443
    IG; Immunoglobulin
    sd00033
    Location:78 → 101
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:220 → 279
    LRR_8; Leucine rich repeat
    cd21340
    Location:65 → 235
    PPP1R42; protein phosphatase 1 regulatory subunit 42

  2. XM_017868813.1 → XP_017724302.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    A0A2K6JP56
    Related
    ENSRBIP00000000798.1, ENSRBIT00000004541.1
    Conserved Domains (6) summary
    smart00013
    Location:47 → 80
    LRRNT; Leucine rich repeat N-terminal domain
    smart00082
    Location:301 → 339
    LRRCT; Leucine rich repeat C-terminal domain
    smart00409
    Location:360 → 443
    IG; Immunoglobulin
    sd00033
    Location:78 → 101
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:220 → 279
    LRR_8; Leucine rich repeat
    cd21340
    Location:65 → 235
    PPP1R42; protein phosphatase 1 regulatory subunit 42
Nucleotide Protein
Heading Accession and Version

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