These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001258419.2 → NP_001245348.1 leucine-rich repeat-containing protein 4C precursor
See identical proteins and their annotated locations for NP_001245348.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein.
- Source sequence(s)
-
AB046800, AC090138, BX951676, DQ084201, DQ084202
- Consensus CDS
-
CCDS31464.1
- UniProtKB/Swiss-Prot
-
Q9HCJ2
- UniProtKB/TrEMBL
- Q4JIV9, Q4JIW0
- Related
- ENSP00000437132.1, ENST00000528697.6
- Conserved Domains (5) summary
-
- smart00013
Location:47 → 80
- LRRNT; Leucine rich repeat N-terminal domain
- smart00082
Location:301 → 339
- LRRCT; Leucine rich repeat C-terminal domain
- smart00410
Location:360 → 443
- IG_like; Immunoglobulin like
- COG4886
Location:77 → 287
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:78 → 101
- LRR_RI; leucine-rich repeat [structural motif]
-
NM_020929.2 → NP_065980.1 leucine-rich repeat-containing protein 4C precursor
See identical proteins and their annotated locations for NP_065980.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the shortest transcript. Variants 1 and 2 encode the same protein.
- Source sequence(s)
-
AB046800, AI806109, DA387604, DQ084201, DQ084202
- Consensus CDS
-
CCDS31464.1
- UniProtKB/Swiss-Prot
-
Q9HCJ2
- UniProtKB/TrEMBL
- Q4JIV9, Q4JIW0
- Related
- ENSP00000434761.1, ENST00000530763.5
- Conserved Domains (5) summary
-
- smart00013
Location:47 → 80
- LRRNT; Leucine rich repeat N-terminal domain
- smart00082
Location:301 → 339
- LRRCT; Leucine rich repeat C-terminal domain
- smart00410
Location:360 → 443
- IG_like; Immunoglobulin like
- COG4886
Location:77 → 287
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:78 → 101
- LRR_RI; leucine-rich repeat [structural motif]
RNA
-
NR_047673.1 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses an alternate 5'-most exon compared to variant 1. This variant is represented as non-coding due to the presence of an upstream ORF that is predicted to interfere with translation of the longest ORF; translation of the upstream ORF renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AB046800, AI806109, AK289646, BC041374
-
NR_047674.1 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) uses an alternate 5'-most exon compared to variant 1. This variant is represented as non-coding due to the presence of an upstream ORF that is predicted to interfere with translation of the longest ORF; translation of the upstream ORF renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AB046800, AI806109, AY358293, BC041374