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PLAC1 placenta enriched 1 [ Homo sapiens (human) ]

Gene ID: 10761, updated on 12-Oct-2019

Summary

Official Symbol
PLAC1provided by HGNC
Official Full Name
placenta enriched 1provided by HGNC
Primary source
HGNC:HGNC:9044
See related
Ensembl:ENSG00000170965 MIM:300296
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CT92; OOSP2B; OOSP2L
Expression
Restricted expression toward placenta (RPKM 19.2) See more
Orthologs

Genomic context

See PLAC1 in Genome Data Viewer
Location:
Xq26.3
Exon count:
6
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) X NC_000023.11 (134565838..134764322, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (133699873..133792513, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene MIR503 host gene Neighboring gene long intergenic non-protein coding RNA 629 Neighboring gene microRNA 424 Neighboring gene ribosomal protein L21 pseudogene 133 Neighboring gene ribosomal protein S7 pseudogene 12 Neighboring gene RNA, U4 small nuclear 44, pseudogene Neighboring gene family with sequence similarity 122B Neighboring gene family with sequence similarity 122C Neighboring gene motile sperm domain containing 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
placenta development IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 
extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
placenta-specific protein 1
Names
cancer/testis antigen 92
placenta specific 1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001316887.1NP_001303816.1  placenta-specific protein 1 precursor

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. All four variants encode the same protein.
    Source sequence(s)
    AK075086, BG436529
    Consensus CDS
    CCDS14642.1
    UniProtKB/Swiss-Prot
    Q9HBJ0
  2. NM_001316888.1NP_001303817.1  placenta-specific protein 1 precursor

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. All four variants encode the same protein.
    Source sequence(s)
    AK075086, BG436529, N55828
    Consensus CDS
    CCDS14642.1
    UniProtKB/Swiss-Prot
    Q9HBJ0
  3. NM_001316889.1NP_001303818.1  placenta-specific protein 1 precursor

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. All four variants encode the same protein.
    Source sequence(s)
    AK075086, AL672032, BC066327
    Consensus CDS
    CCDS14642.1
    UniProtKB/Swiss-Prot
    Q9HBJ0
  4. NM_021796.4NP_068568.1  placenta-specific protein 1 precursor

    See identical proteins and their annotated locations for NP_068568.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the predominant transcript. All four variants encode the same protein.
    Source sequence(s)
    AC004383, AK075086
    Consensus CDS
    CCDS14642.1
    UniProtKB/Swiss-Prot
    Q9HBJ0
    Related
    ENSP00000352173.4, ENST00000359237.9

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p13 Primary Assembly

    Range
    134565838..134764322 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011531257.2XP_011529559.1  placenta-specific protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011529559.1

    UniProtKB/Swiss-Prot
    Q9HBJ0
  2. XM_017029236.1XP_016884725.1  placenta-specific protein 1 isoform X1

    UniProtKB/Swiss-Prot
    Q9HBJ0
  3. XM_011531260.2XP_011529562.1  placenta-specific protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011529562.1

    UniProtKB/Swiss-Prot
    Q9HBJ0
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