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LOC107451989 microspherule protein 1 [ Parasteatoda tepidariorum (common house spider) ]

Gene ID: 107451989, updated on 7-Dec-2023

Summary

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Gene symbol
LOC107451989
Gene description
microspherule protein 1
See related
EnsemblRapid:LOC107451989
Gene type
protein coding
RefSeq status
MODEL
Organism
Parasteatoda tepidariorum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Araneae; Araneomorphae; Entelegynae; Araneoidea; Theridiidae; Parasteatoda
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Genomic context

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See LOC107451989 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current Ptep_3.0 (GCF_000365465.3) Unplaced Scaffold NW_024971303.1 (26733..47856)
100 previous assembly Ptep_1.0 (GCF_000365465.1) Unplaced Scaffold NW_015484720.1 (593429..614743, complement)

NW_024971303.1Genomic Context describing neighboring genes Neighboring gene dnaJ homolog shv Neighboring gene uncharacterized LOC107451988 Neighboring gene uncharacterized LOC122271933

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evaluation of the impact of RNA preservation methods of spiders for de novo transcriptome assembly. Kono N, et al. Mol Ecol Resour, 2016 May. PMID 26561354

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G-quadruplex RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ino80 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of MLL1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of NSL complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
microspherule protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parasteatoda tepidariorum Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ptep_3.0

Genomic

  1. NW_024971303.1 Reference Ptep_3.0

    Range
    26733..47856
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016068254.3 → XP_015923740.1  microspherule protein 1

    Related
    XP_015923740.1, XM_016068254.3
    Conserved Domains (2) summary
    cd00060
    Location:371 → 471
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam13325
    Location:161 → 357
    MCRS_N; N-terminal region of micro-spherule protein
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases