U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

rad54l2 RAD54 like 2 [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107385130, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
rad54l2
Gene description
RAD54 like 2
See related
Ensembl:ENSNFUG00015020178
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539915.1 (29259406..29274127, complement)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr10 NC_029658.1 (25468220..25481668)

NW_026539915.1Genomic Context describing neighboring genes Neighboring gene tumor suppressor 2, mitochondrial calcium regulator b Neighboring gene Ras association domain family member 1 Neighboring gene cytochrome b561 family, member D2 Neighboring gene BRCA1 associated deubiquitinase 1 Neighboring gene bassoon (presynaptic cytomatrix protein) b

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
helicase ARIP4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539915.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    29259406..29274127 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015958804.2 → XP_015814290.1  helicase ARIP4 isoform X1

    UniProtKB/TrEMBL
    A0A1A7Z9Z4, A0A1A7ZPA2
    Conserved Domains (2) summary
    COG0553
    Location:188 → 956
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18069
    Location:328 → 604
    DEXHc_ARIP4; DEXH-box helicase domain of ARIP4

  2. XM_015958805.2 → XP_015814291.1  helicase ARIP4 isoform X2

    UniProtKB/TrEMBL
    A0A1A7ZPA2, A0A1A8UIZ1
    Related
    ENSNFUP00015042556.1
    Conserved Domains (2) summary
    COG0553
    Location:179 → 947
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18069
    Location:319 → 595
    DEXHc_ARIP4; DEXH-box helicase domain of ARIP4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.