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f3a coagulation factor IIIa [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107372568, updated on 14-Mar-2024

Summary

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Gene symbol
f3a
Gene description
coagulation factor IIIa
See related
Ensembl:ENSNFUG00015014342
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026541269.1 (17905..28498, complement)
100 previous assembly Nfu_20140520 (GCF_001465895.1) Unplaced Scaffold NW_015445049.1 (5204..15958)

NW_026541269.1Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette, sub-family D (ALD), member 3a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in blood coagulation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coagulation factor IIIa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026541269.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    17905..28498 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015940791.2 → XP_015796277.1  coagulation factor IIIa

    UniProtKB/TrEMBL
    A0A1A8UW14
    Related
    ENSNFUP00015029476.1
    Conserved Domains (2) summary
    pfam09294
    Location:121 → 230
    Interfer-bind; Interferon-alpha/beta receptor, fibronectin type III
    cl21522
    Location:7 → 97
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
Nucleotide Protein
Heading Accession and Version

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