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LOC107338892 transmembrane protease serine 9-like [ Acropora digitifera ]

Gene ID: 107338892, updated on 2-Nov-2023

Summary

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Gene symbol
LOC107338892
Gene description
transmembrane protease serine 9-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acropora digitifera
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Acroporidae; Acropora
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Genomic context

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See LOC107338892 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Adig_1.1 (GCF_000222465.1) Unplaced Scaffold NW_015441062.1 (423942..432198, complement)

NW_015441062.1Genomic Context describing neighboring genes Neighboring gene putative leucine-rich repeat-containing protein DDB_G0290503 Neighboring gene uncharacterized LOC107338815 Neighboring gene uncharacterized LOC107338901 Neighboring gene integrator complex subunit 6-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015441062.1 Unplaced Scaffold Reference Adig_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protease serine 9-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acropora digitifera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Adig_1.1 Primary Assembly

Genomic

  1. NW_015441062.1 Reference Adig_1.1 Primary Assembly

    Range
    423942..432198 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015904150.1 → XP_015759636.1  transmembrane protease serine 9-like

    Conserved Domains (4) summary
    smart00020
    Location:186 → 426
    Tryp_SPc; Trypsin-like serine protease
    smart00231
    Location:27 → 166
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain
    cd00057
    Location:30 → 165
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    cd00190
    Location:187 → 429
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
Nucleotide Protein
Heading Accession and Version

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