U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107164166 methionine--tRNA ligase, cytoplasmic [ Diuraphis noxia (Russian wheat aphid) ]

Gene ID: 107164166, updated on 2-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC107164166
Gene description
methionine--tRNA ligase, cytoplasmic
See related
EnsemblRapid:LOC107164166
Gene type
protein coding
RefSeq status
MODEL
Organism
Diuraphis noxia
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Diuraphis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Dnoxia_1.0 (GCF_001186385.1) Unplaced Scaffold NW_015368249.1 (1190351..1195637)

NW_015368249.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S14 Neighboring gene CLIP-associating protein 1-like Neighboring gene ankyrin repeat and SAM domain-containing protein 3-like Neighboring gene cadherin-related tumor suppressor

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_015368249.1 Unplaced Scaffold Reference Dnoxia_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables methionine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in methionyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of aminoacyl-tRNA synthetase multienzyme complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
methionine--tRNA ligase, cytoplasmic

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Diuraphis noxia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dnoxia_1.0 Primary Assembly

Genomic

  1. NW_015368249.1 Reference Dnoxia_1.0 Primary Assembly

    Range
    1190351..1195637
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015511888.1 → XP_015367374.1  methionine--tRNA ligase, cytoplasmic

    Related
    XP_015367374.1, XM_015511888.1
    Conserved Domains (4) summary
    cd07957
    Location:422 → 551
    Anticodon_Ia_Met; Anticodon-binding domain of methionyl tRNA synthetases
    cd00814
    Location:45 → 413
    MetRS_core; catalytic core domain of methioninyl-tRNA synthetases
    PRK12268
    Location:44 → 599
    PRK12268; methionyl-tRNA synthetase; Reviewed
    cd00939
    Location:624 → 667
    MetRS_RNA; MetRS_RNA binding domain. This short RNA-binding domain is found at the C-terminus of MetRS in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is repeated in Drosophila MetRS. This domain consists of a helix-turn-helix structure, which is ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases