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SDS serine dehydratase [ Gekko japonicus ]

Gene ID: 107109939, updated on 14-Mar-2024

Summary

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Gene symbol
SDS
Gene description
serine dehydratase
Gene type
protein coding
RefSeq status
MODEL
Organism
Gekko japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Gekkonidae; Gekkoninae; Gekko
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Gekko_japonicus_V1.1 (GCF_001447785.1) Unplaced Scaffold NW_015165387.1 (29214..39264)

NW_015165387.1Genomic Context describing neighboring genes Neighboring gene phospholipase B domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015165387.1 Unplaced Scaffold Reference Gekko_japonicus_V1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-serine ammonia-lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables threonine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-serine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in threonine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
L-serine dehydratase/L-threonine deaminase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gekko japonicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gekko_japonicus_V1.1 Primary Assembly

Genomic

  1. NW_015165387.1 Reference Gekko_japonicus_V1.1 Primary Assembly

    Range
    29214..39264
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015410650.1 → XP_015266136.1  L-serine dehydratase/L-threonine deaminase

    Conserved Domains (2) summary
    cd06448
    Location:10 → 320
    L-Ser-dehyd; Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
    pfam00291
    Location:6 → 304
    PALP; Pyridoxal-phosphate dependent enzyme
Nucleotide Protein
Heading Accession and Version

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