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igf2r insulin-like growth factor 2 receptor [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107083508, updated on 14-Mar-2024

Summary

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Gene symbol
igf2r
Gene description
insulin-like growth factor 2 receptor
See related
Ensembl:ENSCVAG00000016931
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Orthologs
human zebrafish all
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Genomic context

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See igf2r in Genome Data Viewer
Location:
chromosome: Un
Exon count:
50
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150529.1 (427800..491393)

NW_015150529.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 31 Neighboring gene zinc metalloproteinase nas-4-like Neighboring gene solute carrier family 22 member 2-like Neighboring gene solute carrier family 22 member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015150529.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lysosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cation-independent mannose-6-phosphate receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015150529.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    427800..491393
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015372814.1 → XP_015228300.1  cation-independent mannose-6-phosphate receptor

    UniProtKB/TrEMBL
    A0A3Q2EC35
    Related
    ENSCVAP00000029249.1, ENSCVAT00000021942.1
    Conserved Domains (3) summary
    pfam00040
    Location:1896 → 1937
    fn2; Fibronectin type II domain
    pfam00878
    Location:420 → 573
    CIMR; Cation-independent mannose-6-phosphate receptor repeat
    pfam09451
    Location:57 → 183
    ATG27; Autophagy-related protein 27
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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