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igf2r insulin-like growth factor 2 receptor [ Danio rerio (zebrafish) ]

Gene ID: 557061, updated on 26-Nov-2017
Official Symbol
igf2rprovided by ZNC
Official Full Name
insulin-like growth factor 2 receptorprovided by ZNC
Primary source
ZFIN:ZDB-GENE-041014-300
See related
Ensembl:ENSDARG00000006094 Vega:OTTDARG00000006346
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
si:ch211-214g8.2
Orthologs
Location:
chromosome: 20
Exon count:
47
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 20 NC_007131.7 (42565025..42661985)
105 previous assembly GRCz10 (GCF_000002035.5) 20 NC_007131.6 (42668047..42763143)

Chromosome 20 - NC_007131.7Genomic Context describing neighboring genes Neighboring gene si:dkeyp-93d12.1 Neighboring gene transfer RNA leucine (anticodon CAG) Neighboring gene solute carrier family 22 (organic cation transporter), member 2 Neighboring gene plasminogen

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
cation-independent mannose-6-phosphate receptor
Names
CI-MPR
cation-independent mannose 6-phosphate receptor

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039627.2NP_001034716.1  cation-independent mannose-6-phosphate receptor precursor

    See identical proteins and their annotated locations for NP_001034716.1

    Status: PROVISIONAL

    Source sequence(s)
    AL929119
    UniProtKB/TrEMBL
    Q2TTK0
    Related
    ENSDARP00000061100.4, OTTDARP00000006224, ENSDART00000061101.5, OTTDART00000006997
    Conserved Domains (3) summary
    pfam00040
    Location:18841925
    fn2; Fibronectin type II domain
    pfam00878
    Location:413562
    CIMR; Cation-independent mannose-6-phosphate receptor repeat
    pfam09451
    Location:52177
    ATG27; Autophagy-related protein 27

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007131.7 Reference GRCz11 Primary Assembly

    Range
    42565025..42661985
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021468430.1XP_021324105.1  cation-independent mannose-6-phosphate receptor isoform X1

    Conserved Domains (2) summary
    pfam00878
    Location:413562
    CIMR; Cation-independent mannose-6-phosphate receptor repeat
    cl26634
    Location:163302
    ATG27; Autophagy-related protein 27
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