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RNU1-149P RNA, U1 small nuclear 149, pseudogene [ Homo sapiens (human) ]

Gene ID: 107048983, updated on 17-Sep-2024

Summary

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Official Symbol
RNU1-149Pprovided by HGNC
Official Full Name
RNA, U1 small nuclear 149, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48491
See related
Ensembl:ENSG00000212172 AllianceGenome:HGNC:48491
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU1-149P in Genome Data Viewer
Location:
12p12.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (22195469..22195629, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (22073500..22073660, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (22348403..22348563, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105369690 Neighboring gene cytidine monophosphate N-acetylneuraminic acid synthetase Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6097 Neighboring gene sulfotransferase family 6B member 2, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4287 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:22289754-22290362 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_26529 Neighboring gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_26564 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_26565 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_26566 Neighboring gene Neanderthal introgressed variant-containing enhancers experimental_26567/26568 and experimental_26569 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_26571 Neighboring gene uncharacterized LOC112268093 Neighboring gene uncharacterized LOC105369151

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_046347.1 

    Range
    101..261
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    22195469..22195629 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    22073500..22073660 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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