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RNU1-1 RNA, U1 small nuclear 1 [ Homo sapiens (human) ]

Gene ID: 26871, updated on 1-Jul-2024

Summary

Official Symbol
RNU1-1provided by HGNC
Official Full Name
RNA, U1 small nuclear 1provided by HGNC
Primary source
HGNC:HGNC:10120
See related
Ensembl:ENSG00000206652 AllianceGenome:HGNC:10120
Gene type
snRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
U1; HSD1; RNU1; U1A1; HU1-1; RNU1A; RNU1A3; RNU1G4; Rnu1a1
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Genomic context

See RNU1-1 in Genome Data Viewer
Location:
1p36.13
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (16514122..16514285, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (15955819..15955982, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (16840617..16840780, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene NECAP endocytosis associated 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 265 Neighboring gene long intergenic non-protein coding RNA 1772 Neighboring gene CROCC pseudogene 3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:16816921-16817565 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:16817566-16818209 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 331 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 332 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16839913-16840418 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16840419-16840924 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16840925-16841430 Neighboring gene tRNA-Asn (anticodon GTT) 5-1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16858749-16859274 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:16859275-16859800 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:16860360-16861117 Neighboring gene long intergenic non-protein coding RNA 1783 Neighboring gene RNA, U1 small nuclear 6, pseudogene

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Other Names

  • RNA, U1A small nuclear
  • RNA, U1A3 small nuclear
  • RNA, U1G4 small nuclear

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_004430.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL137802
    Related
    ENST00000383925.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    16514122..16514285 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791756.1 Reference GRCh38.p14 PATCHES

    Range
    318424..318587 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    15955819..15955982 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)